Gene Shewmr4_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2345 
Symbol 
ID4252916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2795066 
End bp2796166 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID638118970 
Producthypothetical protein 
Protein accessionYP_734473 
Protein GI113970680 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.97744e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTAGTT TTTTCTCTCG TTGGTATCAA GAGCGCTTTA GCGATCCTCA GGCGGTGACG 
CTGCTGGCCA TTCTCGTGGG TCTTGCCCTT GTGTTGTATT TTGCGGGCGG CTTATTAGCG
CCCTTGTTGG TGGCCTTGGT GCTGGCTTTC TTGCTTGAAT GGCCTGTGGC ACAAATGCTG
AAATTGGGGA TTAACCGCAC GACGGGCGCT TCCTTAGTGC TAGTGCTGTT TTTAGGGATA
GTGGTGGTGC TGACCTTTGG TCTTATCCCG AGCGTGTGGC GCCAAGGCGT GAGTCTGATG
ACAGATTTGC CGAGTATGAT CGACAAGGGA TTACAAACCT TGCAGGGATT AGCGACCCAG
TATCCGCAGT TTGTCAGTTC AGATCAGCTC AATTTAATGG TCGCCGAGCT TAAAAAATTG
CTCGACACCC AGCACCTGCT CGATATTGCT AAGCAACTGA TTGGTTATTC GGCCTCCTTA
TTGGTGCTGA TGGTGTACGC CATTTTAGTG CCCTTATTAG TGTTCTTCTT TCTTAAAGAT
AAAGACCAGC TGATCAGTGG CAGTAAACGT TTTTTCCCTA CCAATCGACA GTTGGCCCGC
AAGGTATGGT TTGAGATGCA CCAGCAGATC TTCAACTATA TCCGCGGCAA GGTGATTGAG
ATTGTGATTG TCGGAGTAGC AAGCTACATC TTCTTTGCCT TTATGGGGCT GAGATACTCG
GCCTTACTCG GGGTGTTGAC CGGCTTGTCT GTGCTCATTC CCTATGTGGG CGCGACCTTA
GTCACCTTGC CCATCACCTT GGTGGCCTTC TTCCAGTGGG GGTTTAGCTC CGAGTTTGGT
TATCTGATGT TAGGTTATGG CATTATTCAG GCGTTAGATG GCAACGTGCT GGTGCCTATC
TTGTTTTCCG ATGCGGTGGA TTTACACCCC GTCATCATCA TTGCCGCCGT GTTAGTGTTT
GGCGGTTTAT GGGGTGTTTG GGGCGTGTTC TTTGCCATCC CATTGGCGTC CTTGGTGAAA
GCGGTGATCA ATGCTTGGCC GAAAACCGAG ATTGAACCTG TAGCGATAAC ACAGGTGAAG
GCGGATTCGG CAGAAGCCTA A
 
Protein sequence
MFSFFSRWYQ ERFSDPQAVT LLAILVGLAL VLYFAGGLLA PLLVALVLAF LLEWPVAQML 
KLGINRTTGA SLVLVLFLGI VVVLTFGLIP SVWRQGVSLM TDLPSMIDKG LQTLQGLATQ
YPQFVSSDQL NLMVAELKKL LDTQHLLDIA KQLIGYSASL LVLMVYAILV PLLVFFFLKD
KDQLISGSKR FFPTNRQLAR KVWFEMHQQI FNYIRGKVIE IVIVGVASYI FFAFMGLRYS
ALLGVLTGLS VLIPYVGATL VTLPITLVAF FQWGFSSEFG YLMLGYGIIQ ALDGNVLVPI
LFSDAVDLHP VIIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPKTE IEPVAITQVK
ADSAEA