| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2039 |
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| Symbol | |
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| ID | 4252612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2425100 |
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| End bp | 2426482 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118655 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_734169 |
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| Protein GI | 113970376 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000344468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00385461 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAC CGACAGCGTT AAGTCTTATT CCACCTCTGG TGGTATTGGT GTTGGCCATT
TGGTTACGCC GCCCCATTCT TTCTCTGATC ATTGGTGCGG TAACTGGGTT TCTGTTACTC
GATCCGTCGC AAGTCTTAAA TAATTTCGCC AGTACTTCAT TAAAAGTCAT GGCCGATGAA
ACCATCGGTT GGTTGATTTT AGTCTGTGGT TGTTTTGGTG CGTTAATTGC CCTGTTAGTG
CGTACTGGTG GTGCACTGGC GTTTGGTCGA AATGCACTGA AATTTGCTAA AGGCCCTAAA
TCCTCTCTGT TTATGACCTT TATTCTCGGG ATTGTGATTT TTATCGATGA CTATCTGAAC
GCGTTAACCG TGGGTGAAAC CATGAAACGT GTGACCGATA AGTTTAAAGT GTCACGTGAA
ATGCTGGCCT ATGTGGTTGA CTCTACAGCA GCGCCAGTTT GCGTGCTCGT GCCATTATCC
ACCTGGGCAG TATTCTTTGG TGGCTTGCTG GTCGATAACG GTGTGGCGGC AGAAGGTCAG
GGCATTAGCG TATATATGCA GGCGATCCCC TACATGCTTT ACGCTTGGTT AGCCGTAGCC
ATGGTGTTAC TGGTGGTGTT AGGTGTTGTG CCTGCCATTG GTCCGATGAA AAAAGCCCAG
CTGCGCGCCG CCCAAGGTGA ACCTGCTGAG GCGCAAGTCG ATTTAGACCA GGTACAAACC
TCTGACGAAT ACGCGATTGC TGCGATTGAA GAAGAGTTTA AGCATGCCGA CAATCAGGGC
AAGCTGCACA ACTTCTTGGT GCCTATTCTG CTACTGGTTG CCTTTACCGT TTATTTTGAT
ATCGACGTGT GGAAGGGCTT ATTAGCGACA TTAGTTATCA CGTTGCCTTA CTATGCAGTG
CAACGTTTAA TGCCACTGTC AGAGATGATG GATCAGATGA TCGATGGTTT TAAGAGCATG
TTGCCCGCCA TTGGTACCGT GATCGCCGCA TTCGTGTTTA AGGATGTGTG TGATGCGCTG
CTGCTGCCAC AATATGTGAT TGAATCATTG AGCCCATTCA TGACGCCTAA GATGTTGCCA
GCGGTAGTAT TCCTCTCTAT GGCTATCCTT GCTTTTGCGA CGGGTTCAAG CTGGGGGATT
TTTGCGGTGA CAATTCCAAT CGTGATGCCA TTGGCGCAAT CGGTTGGTGC TGATATTCCA
CTGGTGATTG GTGCGCTGCT GTCGGCATCA TCTTTTGGTA GCCAAGCGTG TTTCTACTCG
GATTCAACTG TATTGGCCGC ACAAGGCTCT GGTTGTAACT TAGTGAGCCA TGCGGTGACT
CAGTTACCCT ATGCGTTAAT TGCCGCTGTG ATTGCGTTCA TTGGCTTTAT CTTGATTGCC
TAA
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| Protein sequence | MSEPTALSLI PPLVVLVLAI WLRRPILSLI IGAVTGFLLL DPSQVLNNFA STSLKVMADE
TIGWLILVCG CFGALIALLV RTGGALAFGR NALKFAKGPK SSLFMTFILG IVIFIDDYLN
ALTVGETMKR VTDKFKVSRE MLAYVVDSTA APVCVLVPLS TWAVFFGGLL VDNGVAAEGQ
GISVYMQAIP YMLYAWLAVA MVLLVVLGVV PAIGPMKKAQ LRAAQGEPAE AQVDLDQVQT
SDEYAIAAIE EEFKHADNQG KLHNFLVPIL LLVAFTVYFD IDVWKGLLAT LVITLPYYAV
QRLMPLSEMM DQMIDGFKSM LPAIGTVIAA FVFKDVCDAL LLPQYVIESL SPFMTPKMLP
AVVFLSMAIL AFATGSSWGI FAVTIPIVMP LAQSVGADIP LVIGALLSAS SFGSQACFYS
DSTVLAAQGS GCNLVSHAVT QLPYALIAAV IAFIGFILIA
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