| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1225 |
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| Symbol | |
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| ID | 4251264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1424751 |
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| End bp | 1425872 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117810 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_733362 |
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| Protein GI | 113969569 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.461537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT
GCGGATCTCG GTGAGAAGCC TTTCCGTGCC GATCAGCTGA TGAAGTGGAT CTATCATTTC
GGTGTCAGTG ACTTCGAAGA GATGACTAAC ATCAACAAAG TGTTACGCCA AAAACTGGCG
GCGCGCTGTG AGATTGTTGC GCCTGAGATT TCAAGCTATC AAAAATCCGC CGATGGCACC
ATTAAGTTCG CCATCCACGT CGGCGAAGGT CAAGAAGTCG AAACCGTGTA TATTCCTGAA
GATGACCGCG CCACTCTGTG TGTATCATCT CAAGTGGGCT GTGCCCTCGA ATGTACTTTT
TGCTCTACCG CGCAGCAAGG CTTTAACCGC AACTTAACTG TCTCTGAAAT CGTCGGCCAA
ATTTGGCGTG TTTCCCATTT CTTAGGGTTT GCTAAAGATA CCGGCGAGCG CCCAATCACC
AACGTAGTGA TGATGGGCAT GGGTGAACCG CTGCTGAACC TAGCTAACGT GATCCCGGCG
ATGGATATCA TGCTGGATGA CTTCGGTTTT AGCCTGTCAA AACGCCGTGT GACCCTGTCA
ACTTCGGGTG TCGTGCCAGC ATTAGATAAA CTCGGTGATG CCCTCGATGT GGCGCTCGCC
GTGAGTATCC ACGCGCCAAA CGATGAACTG CGCGATATTC TGGTTCCGGT GAATAAAAAG
TATCCATTGC AAGAGTTCCT TGCGGGGATC CGCCGTTACA TCGCCAAATC TAACGCTAAC
CGTGGCCGCG TGACTGTGGA GTATGTGATG CTCGATCACA TCAACGACAG TACTGAACAA
GCCCATGAGT TAGCGCAATT AATGAAGGAT ACTCCTTGCA AGGTTAACCT GATCCCATTC
AATCCATACC CAGGTTCACC CTATGGTCGT TCATCGAACT CGCGCATCGA CCGTTTTTCT
AAGGTATTGA TGGAATATGG CTTAACTGTG ATTGTACGCA AAACCCGTGG TGATGATATT
GACGCGGCCT GTGGACAGTT AGCGGGTGAT ATTCGCGATC GAACCAAGCG TTTAGCAAAA
AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
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| Protein sequence | MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA
ARCEIVAPEI SSYQKSADGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKDTGERPIT NVVMMGMGEP LLNLANVIPA
MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK
YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQENQISV TMN
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