Gene Tery_4492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4492 
Symbol 
ID4246145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6931402 
End bp6932475 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content38% 
IMG OID638109374 
ProductDelta(12)-fatty acid dehydrogenase 
Protein accessionYP_723951 
Protein GI113477890 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.829134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.772005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATCAA ATACTGTTCT TGATCAAACA AATGATACAA AGTCCATAGA GTTGCCCTTT 
ACTCTTCAAG AGGTGAAAGC AGCTATTCCT GCCCACTGTT TTAAATCTTC CCTCTGGAGG
TCTCTTAGCT ACTTCTTTCT GGATATTGGC ATTATCGCAG GTCTATATGG TATTGCTTAC
AGTTTAGATT CATGGTTCTT TTTTCCCTTC TTCTGGTTAA TGCAAGGAAC TATGTTTTGG
GCTTTATTTG TAGTCGGGCA TGACTGCGGT CATGGTTCTT TCTCAAAATA CAAATGGGTT
AATAATTTAG TTGGACACTT GTGTCATACT CCTATTCTCG TGCCATTCCA TGGTTGGCGT
ATTAGTCATA GGACTCATCA TGCTAATACA GGAAATATTG AAACTGATGA AAGTTGGTAC
CCAGTTTCTG AGAGCAAGTA CAATATGATG CTCTGGTATG AAAAGCTATT TCGCTTCTAT
TTATTGTTAT TAGCTTATCC TCTCTACTTA TTTAAGCGAT CGCCTAACCG CGAAGGTTCC
CACTTTGTCC CCAACAGTCC TTTATTCCGT CCCCATGAAA AATCGGATGT TTTAACTAGT
TCAGCACTGT GGATGTTAAT GGTAGGTTTT CTCGGTTGTC TAACTTATCA ATTTGGTTGG
GTCTTTCTAG TAAAATATTA TCTAGTTCCT TATATTATAT TTGTTATCTG GCTAGATTTA
GTAACTTTCC TACATCATAC TGACTCAGAT ATTCCTTGGT ATCGTGGAAA GGACTGGTAT
TTTCTCAAGG GCGCGTTATC AAGTATTGAC CGCGACTATG GTTTCATTAA CTCTATTCAT
CATGACATTG GTACTCATGT TGCTCATCAC ATATTCCTAA ATATGCCTCA TTATCATTTG
AAGACAGCAA CGGAGGCAAT TAAACCTATC CTGGGTGAAT ATTATCACAA GTCAAGCGAA
CCAATATGGA AGAGTTTTAT TAATTCTTAC ATGAATTGTC ATTTTGTCTC AGATACAGGT
TCTCAAATAT ATTATCGATC AGCTTGGAAA AAGCCTTCAG AGGAATTGAG CTGA
 
Protein sequence
MQSNTVLDQT NDTKSIELPF TLQEVKAAIP AHCFKSSLWR SLSYFFLDIG IIAGLYGIAY 
SLDSWFFFPF FWLMQGTMFW ALFVVGHDCG HGSFSKYKWV NNLVGHLCHT PILVPFHGWR
ISHRTHHANT GNIETDESWY PVSESKYNMM LWYEKLFRFY LLLLAYPLYL FKRSPNREGS
HFVPNSPLFR PHEKSDVLTS SALWMLMVGF LGCLTYQFGW VFLVKYYLVP YIIFVIWLDL
VTFLHHTDSD IPWYRGKDWY FLKGALSSID RDYGFINSIH HDIGTHVAHH IFLNMPHYHL
KTATEAIKPI LGEYYHKSSE PIWKSFINSY MNCHFVSDTG SQIYYRSAWK KPSEELS