Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4447 |
Symbol | |
ID | 4246100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6852048 |
End bp | 6857684 |
Gene Length | 5637 bp |
Protein Length | 1878 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638109330 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_723907 |
Protein GI | 113477846 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.516196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTATTC CCTCTATCAG TCAGGTTATT AATTACCATC CCCTTACTGC TACGGCAGAA ACTGCTGTAG AAGATATAAT TATTTCCATG AGTAGTACAG GTTCAAGTTG TGTACTAATT ACAGAAAAAC CATCTTTTTC TACTTCTATA AAAATAGTGA CTCCAGGCGA TCGCAGTCCT GGATCCCCAA AGGGAAATCA TCATTCCAAT TCTCCAGATG CAAAGCTACA ATATTTAGGG CCAGTTATTG GTATATTTAC TGAGGGAGAC TTAGTGCAAT TAGCCTCTAT TGGAGCTCCT CTAAGTGGGT TTCCAATTGC TCAAATTATG ATTAGATCTA TAGTAACAGC ACAACTATCA GAAATTCCAG ATATCTTTGC TCTGTTCGCA CTATTTGAAA AACATAAAAT CAACCATCTA CCAATTGTTG ATAACTTAGA GAGACTTATA GGTCTAATTA CTGGTCACAG TTTTCTTTTA AATCTGAACA ATATCAAAAA AAAGGGTGAA AAATCAATCC TCTCAAGAAA GAAAATTAAG AGTCAACAAA AGTTATCTGC TAATCAAAAT AATACTGTAA ATAAAGGTTT AAAATCTGAG AATAATTTAC TAAAAAATCC AAATAATCAA CTATTACCTC AAGAAATAAC CTTCGACTCA TCTTTAGAGT TACCAGGCAA CTTTATCCCA ATTAATCACC TAGAAAAAAC CCATGAATCT CAAGTTATTC AAGGTTCGTT TTCTTTGTCA ATCAAACAAA TTACCCAACT GATGTCTACC CATAATGTGA GTTATGTTTT GATTATTGAA GCCACAGAAA AAAAATATCA AAATGAGACT GATATTTATC TCAATCAAGA AAGTTCAAAT TCTCAAAAAT CAATCAAAAT TATAGGTACA ATTAGTAGTA GAGATATAGT ACAACTACAG GCATTAAAAA TAGATTTTAA TAAAGTTAAA GCGGGGATAG TTTGTAATAA ATCACCAATA GTAATAGGTT CTGATGTTAC CCTAGAATTA GCTGTAGATT TGATCAACAA AAAATATTGC TTATTGCCCC TAATTGTGCA AAATTATATA GGTAAAATTG ATTATTTTAT TAGTCCTACA AAAGTTATTC GGCAAATACT TCTAAATAAG TCATTATATC AATCATTAAT TCGCTTTTAT AGTTATGTAG AAAAAACATA TTTAAAATTA CATCAAGCTA ATAAAAAACT TAAGCAATAC ACCATTGAAC AGAACAATTT AGAAAAAAGC CAACTAGCAG CGCCAGAAAC TACAGGCATA ACTCTAAAAT TAGATCAAGA TGGAATCTGG GATTGGAACA TCGAAACTGG CGAAATTTTC TACTCGACTT TGGGGGAAAA AATGTTAGGT TATACAGAAC ATGAAATTTC CCATAAAATT AGTTTTGATG AATGGTTAAG TCGAATTCAC CCAGAGGATA GGGATAAAGT TAATACTGCT ATTCAAGAAC ACTTAACTAA AAAAAATACT ATTTATAAAA TCAAATATCG GATTCAAGGT AAAGACAATA ATTTCATCTG GATTTTTGAT AGTGGACAAA CTTTATGGAA ATCAGGAAAA CCAGTGAGAA TGGTAGGAAT TTTTGTTGAT ATTACTAAGG AAAAAGAGGC AGAAATAAAA CAAAGTTTTC TAGTAGAAAA GCATATCCAA ATAATTAATA ATTTGTCGGA AATAGTTTGG GAAACTGATA TTCACGGCAA CTTAATTTTT TTAAATCAAG CATGGGAAAA AATCACTGGT TTTAAACCTA AAAATAGCTT GGGAAAAAAT TTTTTAGACT ATATTCATCC AGAAGATATA AATAAGTTAA ATTTTCTTAC AAAAAATCAT CCAGAAAATA CAGAGTTAGC TATTATTCAT AATAAATTAG TTGCAGATTC CTATCAATTA CAGTTGTTAA CCAAAACGGG AGGCTATTGT CCAGTAAAAA TGAAGAGTAC ATTGGTATTT GATAGGGAAA ACAAGGTTAC TGGTATAGTA AGTACTCTAA GTAATATTTC TGAGGATATT GCCACCCAAC AACAATTACA AGCTAGTCAA AAAGCAATCA AAGAATTGTA TGAAGTGACT ACAAATGCAG ATATTTCCTT TGAAAGCAAA ATAGTGGCAT TACTGGAAAT GGGATGCCAT CGTTTTGGGA TGGATATAGG TTTATTAGGG CAAGTTTTAG GAGAACTTTA TAAAGTTATT GCAGCTCATC TACCAGAAAA TTTTCTATTT GGAATAGCTG AAGGAGACAT TTTTACCCTG GAACAAACAT TTGACCAGGA AGCATTACAA TACGATGAAC CCTTCGTTAT TGAATCAGCG AAAAACTCAC AATGGCGACA TCATCCTGCT CACACAGTGC GTCATGTCGA GTCTTATATT GGCACTAAAA TTTTGGCATC AGGAATAGTT TATGGTACTC TTAGTTTTTC CAGTCGTCTT ACTAAGAATA AGTGGAGTTC TATAGATATA GAAGTTTTAA AACTAATGGC AAATTATATT GGTGGTGAGT TGTTGCGAGA AGATGAGAGA AAAGCTTTAG AAAATAAATA TCAGCACTTT TTATTACTTA AACAAATTAC CCAAGAAATT TGCTCGAAGT TAGATACTAA AGAAATTTTT CAGACTACTG TTACTCAAAT TGGACGAGCA TTTAAAGTGA GCCGTTGTTT AATTCATAGT TATGTTACTG AACCTGATTT ACATCTACCT TGTATGGCTG AGTATTTGGA AACAAACCAT GAATCAATAT TGGGTTTAGA TCTGATTATT ACTTCTAATT ATTATACAGA AAAATTATTA GGAGAAGACA GAGCGATCGC CTCTCCAGAT GTATTTTCAG ATCCTCTGTT AAATTCAGAT GTACCGATGT ACCAGAAACT AAAAGTTAGA TCAATATTGG CAATTCGTAC CTCCTATCAA GGAAAACCAA ATGGTATTAT TCATTTACAT CAATGTGATT ATATACGTCA GTGGAAACAG GATGAAATAA GTTTATTAGA AGAGGTGGCA TTTCAGGTAG GATTAACATT AGCTAAAGCA CAAATATTAG AGTCAGAAGT TACCCATAAA GAAGAATTAG AGGCTGAAAA TCAAGCCTTA GAAAAAGCAC GAGAAGTAGC AGAAGTAAGG AACCGTGCTC AAGGGGAATT ATTAGCAATG ATGAGTCACA AATCTCAGAC CAATATGAAT GATGTAATGA TGATGACAAG TTTGTTATTA AGTATGAAAT TAAATCCTAA ACAAAGAGAT TTTGTGAAGA CTATTCTCGC CAGGGGAGAT GTAGTAATAA ATATGATTAA TAATATTCTT GACTTTACTA AAATTAAATC TGGGGAAGTA GAATTAGAAC TAAGTCCTTT GGATATTAGA GGCTGTGTTG AAGATCTGCT AAAATCATTA GATATAATAG CAAAAAATAA AAAATTAGAA CTTGCTTATT TAATTGATAA AAATGTGCCT AGAATAATTT TAACAGATGA TAAAAAACTG GTTAATATAT TGTTTAATTT ACTAAAAAAT AGTATTAATT TCACAAAAAC AGGAGAAATA GTTGTTTATA TTAGTGCTAT AAAAAAATCG GAAAAAAGTC AGGAATATAG TCAATTAGAA GCAATAAGTT ATGAGGAAAT ATCTGATTTT AAAGGGGCTG GCAAAATCAC AGATAACTAT GAAATACAAT TTGCTGTTAA GGATACAGGT GCTGGTATTC CTCTAGACCA AATAGATCAC TTATTTAAAG ATTTTTCTCA AGTGTCTCCT GCCACGAATA GAGAATATGA TGGTTTAGGT TTAGGATTAG TTATTAGTCA AAGATTGAGT CAAATGATGG GTGGTCAAAT GTGGGTAGTT TCTCAGCCAT TAGAAATTAA GAATTTGTCA GAGGAAAAAA AACAAATATC TCTCTTAAAA ATTGAGGATA GTAGGGACAT TAATTTCCCA AAAAATCCAA TAAATGTTTA TAATTCTAGT TCTCCTGAAT CTAAAGTAAA TATTGCCGGA AATCCACCGC ATTACTTTGT TAAACCAGAA CTAAGTGGCA GAGGTTCAAT CTTTTATTTT ACTATTCAAG CTAAGGCAAT TGCAATGTAT TCTCCGGAAA TAGTTGATGG TTTACTAAGA GGTAAGAAAA TATTGGTTGT AGAAAGTAAT ATTATTAATC AAGAGGAAAT TAAACAGCAA GTTAAGCAAT GGGAAATGAT ACCTATAGTT GCTGATTCTG CTACCAAAGC TTTAAGCGAC TTGGAACAGG GAAAAGTTTT TGATCTTGGA ATTATTGCTA TGGATATTTC AGATATGGAT GGGTTGACAT TAGCTAGAAA GATTCGCAAG TTGGAAGCTG AACAAAACTC AAAACAAAAT AAGAATGATA AGTCATTTTT ACCATTACTA ATGTTGAATT ATATTGATAC AGTAGATATT TCCCGAGAAC TTCAGGAAGC AAAAGTTAGT CTAGCTGGAT TTTTGAATAT ACCTATCAAA CAGTCTCAGT TTTATAATGT TTTATTGGAA GTATTTGGAA CTAGAAAGGA AGAAGAGGTA AACGACAAAG TTCCTAGTTT AGATATGGAA GATTTTCAAG ATTTAAGTGA AAAAAATAGG GATTATACTA ATATTCGTAT ATTGTTAGCA GAGAATAATG TAGTGAATCA AAAAGTTGTA ATACACTTAC TAGAAAAAAT TGGTTACCTT GCAGATGTAG CTGCTAACAA AGTAGAATTT TTGGATGCTT TGAAGCGGAT ATCCTATGAT GTGGTATTAA TGGATGTGCA GATGAATAAT GGAGATGGGA TAGGAATAAC TAATCAAATA TGTCAAAGAT ACTCTGAAGA AAAACGCCCT TGGATAATTG CTATGACAGC TAATGCAAGG TCGGGCGATC GCGAGAAGTA TCTAAATGCT GGTATGGATG ATTATATGAC TAAACCAGTT GATCAGGAAA AATTAGTAGA AGTTTTAAAT AAATTCAAGA GAATACGAAA CCAAAAATTA GGCTCCAAAA CGGATTTAGA AAATGCAGTT AGGAGTCATT CTTCTGTTAT CAGGTCAACA TTAGTTAAAA CTAACTCTTC TAGGCAACCA GTTATTCAGA AGCCGAGTTT TACTAACTTT CAGGTAGAGT CAACTTCTCA GTCAGATGAA ATAATATCAC TCAAAAGTAC GTTGCCTATT GTTATACCAA GCAATATAGA AGATGTACCA GAAACTAAAG AAATTACAAT GCCAGGTTTA GATTTATTAA ACGATCAACA ACTGGCTGTC GATCCTAAAA TTATAGAAAA ATTTTGCAAT CTTTATTATG ATGAACCAGA TACCCCAATT ATTTTGATAC AAGATTATCT TACTGATGGG AATAAAAATA TAAATATGAT TAGGAATTAT ATCAACAAGG GTAATTTTAA TGCATTAAAG ACAGCTTCTC AGAAATTCAA GACTAGCAGT GCTTTATTGG GGGCAATTAA TTTTTCTAAA CTATGTGAAG AGTTAGAGAA GATGGCTCTT GCTGTGATTG AGTCTAGAGA AGATTTTGAT TTAGAAAAAG CTACGAAAAT TTTCTTACAA AGCAAAAATG AATGGGAAAG AGTTCAAAAA GAGTTAAGTA CAAAAATGAA TTGCTAG
|
Protein sequence | MLIPSISQVI NYHPLTATAE TAVEDIIISM SSTGSSCVLI TEKPSFSTSI KIVTPGDRSP GSPKGNHHSN SPDAKLQYLG PVIGIFTEGD LVQLASIGAP LSGFPIAQIM IRSIVTAQLS EIPDIFALFA LFEKHKINHL PIVDNLERLI GLITGHSFLL NLNNIKKKGE KSILSRKKIK SQQKLSANQN NTVNKGLKSE NNLLKNPNNQ LLPQEITFDS SLELPGNFIP INHLEKTHES QVIQGSFSLS IKQITQLMST HNVSYVLIIE ATEKKYQNET DIYLNQESSN SQKSIKIIGT ISSRDIVQLQ ALKIDFNKVK AGIVCNKSPI VIGSDVTLEL AVDLINKKYC LLPLIVQNYI GKIDYFISPT KVIRQILLNK SLYQSLIRFY SYVEKTYLKL HQANKKLKQY TIEQNNLEKS QLAAPETTGI TLKLDQDGIW DWNIETGEIF YSTLGEKMLG YTEHEISHKI SFDEWLSRIH PEDRDKVNTA IQEHLTKKNT IYKIKYRIQG KDNNFIWIFD SGQTLWKSGK PVRMVGIFVD ITKEKEAEIK QSFLVEKHIQ IINNLSEIVW ETDIHGNLIF LNQAWEKITG FKPKNSLGKN FLDYIHPEDI NKLNFLTKNH PENTELAIIH NKLVADSYQL QLLTKTGGYC PVKMKSTLVF DRENKVTGIV STLSNISEDI ATQQQLQASQ KAIKELYEVT TNADISFESK IVALLEMGCH RFGMDIGLLG QVLGELYKVI AAHLPENFLF GIAEGDIFTL EQTFDQEALQ YDEPFVIESA KNSQWRHHPA HTVRHVESYI GTKILASGIV YGTLSFSSRL TKNKWSSIDI EVLKLMANYI GGELLREDER KALENKYQHF LLLKQITQEI CSKLDTKEIF QTTVTQIGRA FKVSRCLIHS YVTEPDLHLP CMAEYLETNH ESILGLDLII TSNYYTEKLL GEDRAIASPD VFSDPLLNSD VPMYQKLKVR SILAIRTSYQ GKPNGIIHLH QCDYIRQWKQ DEISLLEEVA FQVGLTLAKA QILESEVTHK EELEAENQAL EKAREVAEVR NRAQGELLAM MSHKSQTNMN DVMMMTSLLL SMKLNPKQRD FVKTILARGD VVINMINNIL DFTKIKSGEV ELELSPLDIR GCVEDLLKSL DIIAKNKKLE LAYLIDKNVP RIILTDDKKL VNILFNLLKN SINFTKTGEI VVYISAIKKS EKSQEYSQLE AISYEEISDF KGAGKITDNY EIQFAVKDTG AGIPLDQIDH LFKDFSQVSP ATNREYDGLG LGLVISQRLS QMMGGQMWVV SQPLEIKNLS EEKKQISLLK IEDSRDINFP KNPINVYNSS SPESKVNIAG NPPHYFVKPE LSGRGSIFYF TIQAKAIAMY SPEIVDGLLR GKKILVVESN IINQEEIKQQ VKQWEMIPIV ADSATKALSD LEQGKVFDLG IIAMDISDMD GLTLARKIRK LEAEQNSKQN KNDKSFLPLL MLNYIDTVDI SRELQEAKVS LAGFLNIPIK QSQFYNVLLE VFGTRKEEEV NDKVPSLDME DFQDLSEKNR DYTNIRILLA ENNVVNQKVV IHLLEKIGYL ADVAANKVEF LDALKRISYD VVLMDVQMNN GDGIGITNQI CQRYSEEKRP WIIAMTANAR SGDREKYLNA GMDDYMTKPV DQEKLVEVLN KFKRIRNQKL GSKTDLENAV RSHSSVIRST LVKTNSSRQP VIQKPSFTNF QVESTSQSDE IISLKSTLPI VIPSNIEDVP ETKEITMPGL DLLNDQQLAV DPKIIEKFCN LYYDEPDTPI ILIQDYLTDG NKNINMIRNY INKGNFNALK TASQKFKTSS ALLGAINFSK LCEELEKMAL AVIESREDFD LEKATKIFLQ SKNEWERVQK ELSTKMNC
|
| |