| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4135 |
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| Symbol | |
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| ID | 4245649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6379583 |
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| End bp | 6380458 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109036 |
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| Product | Fe-S cluster assembly protein NifU |
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| Protein accession | YP_723616 |
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| Protein GI | 113477555 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000225432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGGAAT ATACTGAAAA GGTAATGGAT TTGTTCTATA ACCCCCAAAA CCAAGGAACT
ATTACAGACA AAAAAGAGGG GGAAAAGATA GTTAGTGGTG AAGTAGGAAG TATAGCCTGT
GGAGATGCTT TAAGTCTACA CCTCAAAGTA AATGAAGCCT CCGGTGAAAT ATTAGATGCC
AAATTTCAAA CCTTTGGCTG TGCAAGTGCG ATAGCTTCAT CTTCTGCCCT AACAGCAATG
CTCAAAGGCA AAACCATAGA CGAAGCCATG AATATTAAAA ACCAGGATAT TGCCGGATAC
CTGGGAGGGC TGCCAGAAGA AAAAATGCAC TGTTCAGTCA TGGGAGAGGA AGCATTAGAA
GCGGCAATAT TTAAGTACAA AGGTATTGAA GTAGAAGTTC ACGAAGAAGA CGACGAAGGA
TCATTAGTTT GTAGTTGTTT TGCGATAACA GAAAACAAGA TTAAGCGAGT TATTTTGGAA
AACAATCTCA AAACAGCGGA AGAAGTAACA AACTATGTCA AAGCTGGTGG TGGTTGTGGT
TCTTGTCTGG CAGATATTGA TGATCTCGTC GCATCGGTTT ATGAAGCGCC AGACACTACA
ACGCAACAAA TTCCTACAAC TACTAAACCA GCAACCAACC TGACAAACTT GCAAAAAATT
ACATTAATTC AGCAAGTATT ACAACAAGAG GTGAGGCCAG TTCTCGCCGA AGATGGAGGA
GATGTTGAGT TATTCGATGT AGATGGCGAT CGCGTGCTAG TCAAACTCAA AGGAGCTTGT
GGTTCTTGCA GTAATGTGCT AGTAACGCTA AAAGGAGCGA TCGAAGCTAC ATTAAAAGAA
CGAGTTAGTG AAAGTCTTGT AGTAGAAGCG GTATAA
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| Protein sequence | MWEYTEKVMD LFYNPQNQGT ITDKKEGEKI VSGEVGSIAC GDALSLHLKV NEASGEILDA
KFQTFGCASA IASSSALTAM LKGKTIDEAM NIKNQDIAGY LGGLPEEKMH CSVMGEEALE
AAIFKYKGIE VEVHEEDDEG SLVCSCFAIT ENKIKRVILE NNLKTAEEVT NYVKAGGGCG
SCLADIDDLV ASVYEAPDTT TQQIPTTTKP ATNLTNLQKI TLIQQVLQQE VRPVLAEDGG
DVELFDVDGD RVLVKLKGAC GSCSNVLVTL KGAIEATLKE RVSESLVVEA V
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