Gene Tery_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3302 
Symbol 
ID4243608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5064988 
End bp5066241 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content37% 
IMG OID638108290 
Productcell cycle protein 
Protein accessionYP_722881 
Protein GI113476820 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.311457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00878539 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGAATA AATTAGTCTT AAGAAATGGC CGAAAATCAC TCCTTTCAAG CTGGAAATAT 
ATAGATTGTA AATTACTACT GGTTTATATA GGAATGACGA TCTTTGGTGG AATTATAATC
CAAAGTGTGG AAAAAAATCA GGGGCTGACA GACTGGTGGC AGCATTGGCT TACAGGAGGA
GTAGGTTTGA TTTTGGCCCT AATTATTGCT CGTTGTCGCT ACGAAGTGTT AGTTCGCTGG
AAATGGGCAA TTTACATTTT GACCAATATT TCCCTAGTTG CGGTACAGGC TCTAGGTACT
TCAGCTCTGG GAGCACAACG GTGGATTAAT GTTGCTGGCT TTCATGTTCA ACCTTCGGAA
TTCGCTAAGG TGGGAATAAT TATTACTTTG GCAGCAATAC TTTCTTCTAA GCCTAAGGTA
AAGCTATTCG ATTTGTTTCA AGTTCTAATT GTTACAGCCA TTCCCTGGCT ATTAGTTTTT
TTAGAACCAA ATCTGGGTAC TTCATTAATA TTTGGTGTTA TTACTATAGG AATGCTTTAC
TGGGGTAATA TTAATCCTGG GTGGTTAATA TTACTTGTCT CTCCCATTTT CTCAATTATT
CTTCATAATC TATATACCCC TGCTTGGTTT GCATGGATAA CTCTGATGGC CTTAATAGCT
TGGCGTAGTC TACCTTGGGG ATGGTTATGG ACGCCTATAG TTGCTGGTAT TAATATTTGT
TCTTCAAATG TTGCGCAAAC TTTATGGCAT CTTCTCAAAG ACTATCAAAA AGATAGATTA
ACGGGATTTC TTAATCCGGA ACAAGACCCT TTGGGTACAG GATATCATTT GATTCAATCT
CGCATTGCTA TAGGATCTGG ACAACTTTTT GGTAGAGGAT TATATCAAGG CACTCAAACT
CAACTGAATT TTATTCCAGA GCAACATACG GATTTTATCT TCTCAGCTAT TGGGGAAGAG
TTTGGTTTCA TTGGTTGTAT TTTTGTACTG TTTGCTTTTT GGTTTATTTG TCTACGCTTG
GTGATTATTG CTTACACTGC TAAAGATAAT TTTGGTTCTC TTATAGCCAT TGGAGTATTA
TCAATGTTAA TCTTCCAAGT TTTTGTAAAT ATTGGTATGA ATATTGGTTT GGCTCCTGTG
ACTGGGATCC CACTACCTTT ACTTAGTTAT GGGCGTTCGG CTTTGTTGAG TAACTTTATT
GCTTTAGGAC TAGTAGAGTC AGTGGCTAAT AATAAACCTA AACAAAATTT TTGA
 
Protein sequence
MTNKLVLRNG RKSLLSSWKY IDCKLLLVYI GMTIFGGIII QSVEKNQGLT DWWQHWLTGG 
VGLILALIIA RCRYEVLVRW KWAIYILTNI SLVAVQALGT SALGAQRWIN VAGFHVQPSE
FAKVGIIITL AAILSSKPKV KLFDLFQVLI VTAIPWLLVF LEPNLGTSLI FGVITIGMLY
WGNINPGWLI LLVSPIFSII LHNLYTPAWF AWITLMALIA WRSLPWGWLW TPIVAGINIC
SSNVAQTLWH LLKDYQKDRL TGFLNPEQDP LGTGYHLIQS RIAIGSGQLF GRGLYQGTQT
QLNFIPEQHT DFIFSAIGEE FGFIGCIFVL FAFWFICLRL VIIAYTAKDN FGSLIAIGVL
SMLIFQVFVN IGMNIGLAPV TGIPLPLLSY GRSALLSNFI ALGLVESVAN NKPKQNF