| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3293 |
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| Symbol | |
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| ID | 4243599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 5050838 |
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| End bp | 5052073 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108283 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_722874 |
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| Protein GI | 113476813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.792404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00697344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCAACAA TTAACGATAA CTACCTCAAA CTTAAAGCCG GATACTTATT TCCAGAAATA
GCTAGACGAG TTAATACATT TGCTGAAGCA CACCCGGAAG CCCAGATCAT TAAATTGGGT
ATTGGGGATG TAACTGAGCC ATTGCCAAAA GCTTGTATTC AGGCTATGAC TAAAGCTGTA
GCAGAAATGG GCGATCGCTC AACTTTTAAG GGTTATGGCC CAGAGCAAGG TTATGCTTGG
TTGCGCGAAA AAATTGCTGC TCAAGATTTT CAGGGGCGAG GATGTGATAT TGATGCCTCG
GAAATTTTCA TTTCTGATGG ATCTAAGTGT GATAGTGGTA ATATTCTAGA TATTATTGGT
AATAATAATA CTATTGCGGT GACTGATCCA GTATACCCAG TGTATGTAGA TACGAATGTA
ATGGCGGGTA ACACTGGTGC TGTAAATGAG AAAGGGGAGT ATGAGGGTTT AGTTTATTTA
CCAATAAGAG CGGAAAATAA TTTTACTGCG GAAATTCCTA CTCAAAAGGT AGATTTGATT
TATTTGTGTT TTCCCAATAA CCCTACTGGT GCGACTGCCA CTAAAGAATA TTTGCAAACA
TGGGTAAATT ATGCTAGAGC GAATGATGCC ATTATTTTAT TCGATGCTGC TTACGAAGCA
TTTATTACCG ATGCCAGTCT TCCTCATTCT ATTTATGAGA TAGAAGGAGC AAAAGAATGT
GCCATTGAAT TTCGCTCCTT TTCCAAGAAT GCTGGTTTTA CAGGTACTCG TTGTGCGTTG
ACTGTCGTAC CCAAAACTCT GAAAGGGAAA GCTGCTGATG GTAGCGATGT AGAATTATGG
AAATTGTGGA ACCGTCGCCA GTCTACTAAA TTTAATGGAG TTTCTTATAT TGTGCAGCGA
GGTGCAGAGG CAGTTTACTC CGAAGAAGGG AAAGCACAGG TTAAGGGGTT GATCCAATTT
TATTTAGAGA ATGCGAAAAT TATCTGCTCT CAGTTACAAG CAGCAGGTTT AACTGTTTAT
GGTGGGGTAA ATGCGCCTTA TGTTTGGGTG CAGACTCCTA CAGGTTTGTC GAGTTGGGAT
TTTTTCGATA AGCTGTTGCA AAATTGTAAT GTTGTGGGAA CTCCCGGTTC CGGCTTTGGT
GCTGCAGGTG AAGGTTACTT CCGCATTTCT AGTTTTAATA GTCGGGAAAA TGTTAATGAA
GCGATGAAAC GGATAACTGA GAAATTTAAA GTTTAG
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| Protein sequence | MATINDNYLK LKAGYLFPEI ARRVNTFAEA HPEAQIIKLG IGDVTEPLPK ACIQAMTKAV
AEMGDRSTFK GYGPEQGYAW LREKIAAQDF QGRGCDIDAS EIFISDGSKC DSGNILDIIG
NNNTIAVTDP VYPVYVDTNV MAGNTGAVNE KGEYEGLVYL PIRAENNFTA EIPTQKVDLI
YLCFPNNPTG ATATKEYLQT WVNYARANDA IILFDAAYEA FITDASLPHS IYEIEGAKEC
AIEFRSFSKN AGFTGTRCAL TVVPKTLKGK AADGSDVELW KLWNRRQSTK FNGVSYIVQR
GAEAVYSEEG KAQVKGLIQF YLENAKIICS QLQAAGLTVY GGVNAPYVWV QTPTGLSSWD
FFDKLLQNCN VVGTPGSGFG AAGEGYFRIS SFNSRENVNE AMKRITEKFK V
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