| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3278 |
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| Symbol | |
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| ID | 4243584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5030998 |
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| End bp | 5032506 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108272 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_722863 |
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| Protein GI | 113476802 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.312837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGAA CAAAAGATGT GATTGTAATT GGTAGTGGTA TTGGAGGCCT CGTTGCTGGA
GCAATGCTCG CCTACTATGA CAAAAAGGTA GTAATTTGTG AAAGCCATAG TATTCCTGGG
GGAGCCGCTC ACTCTTTCTC TCGTCAAGGT TTTCATTTTG ATTCGGGCCC ATCTTTTTAT
TGTGGGTTAG CTGACCCTAA TAGTCTTAAT CCTTTACAAA AAGTTTTCAA CATTTTGGGC
GAATCAATTG AAACATGTGT CTATGATCCT CTTGGACATT ACCATTTTCC AGAAGGCAGT
TTGCCTGTCT ATGCTGGTGG GACATCTTAT TTAGAAGCAG TTGCTAAGTT CACCACTCAA
GGTGCTAAAG AATTAAAACT TTTTCAAGAT AATCTTTTAC AACTGTATGC TGGTCTTAAA
GGAATTCCCC CTATAGTTTT AAGGGCTGAT TTTTGGTTAA TACCGATTTT ATTAGGAAAA
TATGGATTAT CCCTACTAAA AATGTTGCCT TCCCTGGGAG AGGTAGGAGG TTCTGTTGGA
CAAATCATGG ATAAGTGGGT AAAAGACCCT TGGGTGCGTC GTTTAATAGA CTTGGAATGT
TTTCTATTGT CTGGGTTGAA GGCTAATGGT ACTGTTGCCC CAGAAGTAGC ATTTATGTTC
GGAGAACGTT CTAACTCCGT GATTGAATAT CCTATTGGTG GTAGTAGTGC AATAGTTAAT
GCCTTAGTTA GAGGTTTGGA GCGTTGGGGT GGTCAATTAC GTTTGAATGC TCATGTAGAA
CAAATCTTAA TAGAGTCTGG TCAAGTTGTG GGGGTTCGCT TGAGAGGAGA TGAGGTTATC
AAAGCTCCTA TTGTTATTTC TAATGCTACT ATTTGGGACA CCTATACTCA GTTATTAAGA
CCTGAAGATT TACCCACTTC TTTACATAAA GAAGCTTTGG GGACTCCTGC GGTAGAAAGT
TTTATGCACT TACACTTAGG TATTCGTTCT GATGGTTTAG AAGGTTTGAC TGGACATCAT
GTGGTTGTTC TCAATGGAGA TATTGATATT TCTGTTCCTG GCAATACTTG CATGATTTCT
ATTCCTTCGG TTTGGGATCC TACTTTAGCT CCTTCTGGTC ATCATGTTAT CCATGCTTAT
ACTTTGGAAT CTTTTTCTGG TTGGCAAAAA GATGAATCTT ATTCCCAACG GAAACGGGAA
AAAGCAGAAT CTTTGTTTTT AGCTTTGGAA AGAATAATTC CTGATATTCG CCAACGTATA
ACTCTGGAGT TAATTGGTAC TCCCCTGACT CATGCTCGCT TTTTGCGTCG TTATCAGGGT
ACTTATGGAC CTGCTATTGT TGCTGGCAAG GGTAGTTTCC CTGGACCTCA AACTCCTATC
CCTGGTTTGT ATCGGGTGGG AGATAGTACA ATGCCTGGTA TTGGTGTACC GGCAGTTGCT
GCTTCTGGAG TTATTTGTGC GAATACTTTG GCTTCTCTTA ACTATTTGAA ACTTCTGAGG
CAACTCTAA
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| Protein sequence | MVRTKDVIVI GSGIGGLVAG AMLAYYDKKV VICESHSIPG GAAHSFSRQG FHFDSGPSFY
CGLADPNSLN PLQKVFNILG ESIETCVYDP LGHYHFPEGS LPVYAGGTSY LEAVAKFTTQ
GAKELKLFQD NLLQLYAGLK GIPPIVLRAD FWLIPILLGK YGLSLLKMLP SLGEVGGSVG
QIMDKWVKDP WVRRLIDLEC FLLSGLKANG TVAPEVAFMF GERSNSVIEY PIGGSSAIVN
ALVRGLERWG GQLRLNAHVE QILIESGQVV GVRLRGDEVI KAPIVISNAT IWDTYTQLLR
PEDLPTSLHK EALGTPAVES FMHLHLGIRS DGLEGLTGHH VVVLNGDIDI SVPGNTCMIS
IPSVWDPTLA PSGHHVIHAY TLESFSGWQK DESYSQRKRE KAESLFLALE RIIPDIRQRI
TLELIGTPLT HARFLRRYQG TYGPAIVAGK GSFPGPQTPI PGLYRVGDST MPGIGVPAVA
ASGVICANTL ASLNYLKLLR QL
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