| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2928 |
|---|
| Symbol | |
|---|
| ID | 4244765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4548636 |
|---|
| End bp | 4549673 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107969 |
|---|
| Product | radical SAM protein |
|---|
| Protein accession | YP_722566 |
|---|
| Protein GI | 113476505 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.333944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.253326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAT CTTTCAAAAC TCCTACTCAA ACTCCTCTCC TTGGTTTATC CTTAGCTAAG
TTAACTGAGT GGGTGCAACA ACAGGGACAA CCTGCTTATC GAGGTAAACA ACTATATCAA
TGGATTTATC AAAAAGGGGC TAAGTCTCTT GCAGATATTA CTGTATTTTC CAAACAATGG
CGTGAGGAAA TTAGTAATTT TCCTATTGGT CGTTCTGTCA TACATCATCG CTCTGTTGCT
CCAGATGCTA CAGTTAAATA TTTGCTAAAA TTATCAGATG GCAATATAAT TGAAACTGTG
GGTATTCCTA CTTATAAACG CTTAACTGTT TGTGTTTCTT CTCAGGTTGG CTGTCCAATG
GCCTGTGATT TTTGTGCTAC TGGTAAGGGT GGTTTTAGCC GTAACCTAGA AGCACATGAA
ATTATCGATC AAGTACTAAC GGTGCAAGAA GATTTTGAGC GACGGGTCAG CCATATCGTG
TTTATGGGAA TGGGGGAACC TCTGCTGAAT ACTAAAAATG TTTTGGCTGC AGTTAGGTCT
CTGAATCAAG ATTTAGGTAT TGGGCAACGT TTGATAACTA TCTCGACTTC GGGGATTCGT
GATCGCATCC GGCAATTAGC TCAACATAAA TTGCAGGTGA CCCTTGCTGT TAGTCTTCAT
GCTTCTAATC AAAGATTGCG GGAACATCTG ATTCCTAGTG CTAAGTTTTA TCCTTTAGCT
GATTTGATAT CAGAATGCCG TGAATATGTC AAGATAACAA AGCGGAGAAT TAGTTTTGAA
TATATTTTGT TAGCAAGTTT TAATGATTTA CCAGATCATG CTAGAGAATT AGCAAAAAAT
ATGCGTGGGT TTCAGTGTCA TGTTAATTTA ATTCCTTATA ATCCTATTAG TGAAGTTGAT
TATCAACGAC CTACTCAGGA GATGATAAAA ACTTTTGCTA ATGCTTTGGC AGAACAAAAT
ATTGCAGTTA GCATTCGTTA TTCCCGTGGT CTAGAAGCTA ATGCAGCTTG TGGACAATTA
CGGGCTTCGC GGGTTTAA
|
|---|
| Protein sequence | MTQSFKTPTQ TPLLGLSLAK LTEWVQQQGQ PAYRGKQLYQ WIYQKGAKSL ADITVFSKQW
REEISNFPIG RSVIHHRSVA PDATVKYLLK LSDGNIIETV GIPTYKRLTV CVSSQVGCPM
ACDFCATGKG GFSRNLEAHE IIDQVLTVQE DFERRVSHIV FMGMGEPLLN TKNVLAAVRS
LNQDLGIGQR LITISTSGIR DRIRQLAQHK LQVTLAVSLH ASNQRLREHL IPSAKFYPLA
DLISECREYV KITKRRISFE YILLASFNDL PDHARELAKN MRGFQCHVNL IPYNPISEVD
YQRPTQEMIK TFANALAEQN IAVSIRYSRG LEANAACGQL RASRV
|
|---|
| |