Gene Tery_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0401 
Symbol 
ID4241965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp627137 
End bp627862 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content36% 
IMG OID638105726 
Productpentapeptide repeat-containing protein 
Protein accessionYP_720340 
Protein GI113474279 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.573387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.48358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC TAATATTGGC AATTATAATT ATTGTCTCCC AAGGTGGTTG GATAAATTTA 
GCAAAGGCAG CCAACCCAGG AGCTATTAGA AGACTATTAG AGACTAATGA ATGTTCAGGA
TGCGACCTTA CTCAAGCGAA CCTATCTAAT GCTAACTTGA TCGGAGCTGA CTTAGAAGGT
GCTAACCTCC GAGGAGCAAA TTTGTCTGGC GCTAACCTAG GGGTAACAAT TCTTTCTAAT
GCTAATCTTT CTAATGCTAA CCTTTCTAGA GCAATAATGA ATGATGCAGA TCTTCGAGGT
GCAAATTTAA CAGATGCTTA CTTAAGTAAT GCTAATTTAT CCAGAGCTTA TCTCACAAAA
GCCAATTTAG AAAATGCTAA TTTATTTGAA GCAAATTTGA TTGAATCTCT TGCTAGTGGA
GCTAATTTAT CTAATGCAAA TTTACGTCAT TCATATTGGT TTCGAGCCAA TTTAGAAAAT
GCTGATTTGA GAGAATCTGA TCTTTTCAAT GCTAATATGC ATCAAGCAAA TTTGAAGAAT
GCAGACTTCT CTAATGCTAA CCTTACTACA GCCAAATTGA TGGAAACAAA TATAACGCTT
GCTAATCTAA GTGGAGCAAC TTTAGAAGGG GTTAACCTTC GTGGTACAAG TATAGGTTCA
AGTGTATGTT TAATTACCAA TTATATAGGT TGTGCGCCAC CAAAAGTAAT TCCTGAAGTT
AAATAA
 
Protein sequence
MKLLILAIII IVSQGGWINL AKAANPGAIR RLLETNECSG CDLTQANLSN ANLIGADLEG 
ANLRGANLSG ANLGVTILSN ANLSNANLSR AIMNDADLRG ANLTDAYLSN ANLSRAYLTK
ANLENANLFE ANLIESLASG ANLSNANLRH SYWFRANLEN ADLRESDLFN ANMHQANLKN
ADFSNANLTT AKLMETNITL ANLSGATLEG VNLRGTSIGS SVCLITNYIG CAPPKVIPEV
K