| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0348 |
|---|
| Symbol | cstA |
|---|
| ID | 4239824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 353182 |
|---|
| End bp | 354765 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638103891 |
|---|
| Product | carbon starvation protein A |
|---|
| Protein accession | YP_718558 |
|---|
| Protein GI | 113460494 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000180552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATGGT TTTTCTTTTG TGTTGCCCTA TTGATTTTAG GCTATTTCAC ATACGGTAAA
TTTGTTGAGA AAGTATTTGT TATCAATCCG AACAAGAAAA CGCCCGCTTA TTCTATGACA
GATGGTGTTG ACTATGTTCC GATGTCTAAA AAGAAAATTT GGCTAATTCA ATTATTGAAT
ATCGCAGGCA CAGGTCCAAT TTTCGGACCG ATTATGGGGG CATTGTATGG ACCGGTGGCG
ATGTTATGGA TTGTACTGGG TTGTGTATTT GCTGGTGCGG TACATGATTA TTTCTGTGGT
ATGTTGAGTG TTCGTAATGG TGGTGCTTCA ATGCCTACTC TTGCCGGACG CTATTTAGGT
ACTCCCGTTA AAGTATTTAT TAACGTACTT GCCGTTGTTT TATTATTCCT TGTCGGGATT
GTGTTTGTAA CCAGTCCTGC TCAGTTATTA AGTACTATTA CTTTAGATAT GTTTGGTAGT
GCAAGTACGG CTACAACCAA TGCACATGAG GTGGTAAGTG CGGTACAAAA CGCTGGTGAG
ATCCGTGTTT GGGGAATGGA TAAACCGACA GTTGTGGCGG TTTGGACTGG AATTATTTTC
CTTTACTATA TTGTGGCGAC ATTGTTACCG ATTGATAAGA TTATTGGACG TATTTATCCG
TTATTTGGTG GACTATTATT ATTCATGTCT GCCGGTATGG TATATGGCTT AGTATCCAGC
CATTTAAATG GTGCTGATCC AATTGAATTT TTCCGTTCTG TTGATGGTAT GAGCTTTGAA
AAATTCTTAC AAAACTTTGA AACTCGTAAA GAGCTACCAT TATGGCCATT ATTATTCTTA
ACCATTTCTT GTGGTGCACT TTCCGGTTTC CATGCAACTC AATCTCCATT GATGGCACGT
TGTGCTGAAA ATGAGAAAGA AGGTCGTTTT ATTTTCTACG GAGCCATGAT TGCAGAAGGT
GTTATTGCTT TAGTTTGGTG TACTGTTGGT TTAAGTTTCT ATGAAAATTT GGGTGAACTA
TTAGCTGCAA CCCAACAAGG TTCACCTTCC AAAGTAGTGT ATGATTCTTC TATTTATTTC
TTAGGGACTA TTGGTGGTGT TTTTGCTGTA TTAGGGGTAG TTGTGCTACC TATTACTTCC
GGAGATACAG CATTCCGCTC CGCTCGTTTG ATTATTGCGG AGTTCTTAAA AATTGAACAA
CGCACTTTGG TGAAACGGTT ACTTATTGCA GTTCCGTTAT TTGCAGTCGG TTTTTGGATT
ATTGCATCAA AAATTGACTT TGGTGTGTTG TGGCGTTATT TCACTTGGGC AAACCAAGCA
ACAGCAATGG TGATGCTATG GACAGCTGCG GCTTATCTAT ATCGTTACAA TAAATTCCAT
TGGGTGTGTA CTATTCCGGC AGCGTTTATT AGTGCGGTAT GTTTTACATA CTTAGCCTAT
AACAAAATTG GTTTTGGTTT AGATTATCAA CTTTCCGTTT ATATTGGTAT TGGATTAACT
ATTTTGTGTT TAGTGGCTTT CTTTACTTTA TTGAAACCGT TAGGTTCGAA AGATCCGGAT
GCCTTTATAA ATGATGCTAC ATAA
|
|---|
| Protein sequence | MLWFFFCVAL LILGYFTYGK FVEKVFVINP NKKTPAYSMT DGVDYVPMSK KKIWLIQLLN
IAGTGPIFGP IMGALYGPVA MLWIVLGCVF AGAVHDYFCG MLSVRNGGAS MPTLAGRYLG
TPVKVFINVL AVVLLFLVGI VFVTSPAQLL STITLDMFGS ASTATTNAHE VVSAVQNAGE
IRVWGMDKPT VVAVWTGIIF LYYIVATLLP IDKIIGRIYP LFGGLLLFMS AGMVYGLVSS
HLNGADPIEF FRSVDGMSFE KFLQNFETRK ELPLWPLLFL TISCGALSGF HATQSPLMAR
CAENEKEGRF IFYGAMIAEG VIALVWCTVG LSFYENLGEL LAATQQGSPS KVVYDSSIYF
LGTIGGVFAV LGVVVLPITS GDTAFRSARL IIAEFLKIEQ RTLVKRLLIA VPLFAVGFWI
IASKIDFGVL WRYFTWANQA TAMVMLWTAA AYLYRYNKFH WVCTIPAAFI SAVCFTYLAY
NKIGFGLDYQ LSVYIGIGLT ILCLVAFFTL LKPLGSKDPD AFINDAT
|
|---|
| |