| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_C0004 |
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| Symbol | |
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| ID | 4206678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008265 |
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| Strand | - |
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| Start bp | 6108 |
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| End bp | 9644 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | |
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| Product | phage tail tape measure protein, TP901 family, core region domain protein |
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| Protein accession | YP_699933 |
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| Protein GI | 110804068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT TAGAAAAACG AATAACGGCT AAAATGGTTT TAGATGATAG TGGTTATTCT
AATACATTAA AAGGTATTAA TGCTACTTTA AGAGAAAATA AAAGTGAACT TAAAGCAGCT
ACAAGTGGAT TAAATGCATT TGGTAAAAGT ACCAGTAATG TAGAAAGGGT TCAAAGAGCT
TTTAAGGATC AGCTAGAAAC ACAAGCTAAA AAAGTTAAAG TTTATAAAGA TAGCTTAAAA
AAAGCGAATG ATACTCTTGA AAAGAATGTT GCTACTAGAT CTAAATTAGT TAAAAGTATT
TCACAAGAAG AAGCTAAACT TAGTTCTTTA AAAAAGAAAT ATGGGGAAAA TAACGATGCT
GTAAGAAATG TAGAAAAAAG ACTAGAAGAA TATAAAGAAA AACTTGAAAA AGTAGATAGT
TCTATTGAAA GTAATTCTAA GAGAATACAA TCTTATTCTA CACAATTAAA TAATGCAGAA
GCTGAATTAA ATAAAGCAGC TGCTGCTGCT AAAAAATTTA ATGATGAAGT AGCAAAAAAT
AATGGTTTAA AAACTACTTC TAAAAAATTA GAGGAAGCAA GTTCTAACTT TAAAAAATTT
GGAGAAGGAG CTAAGAAAGT AGGTTCTTCT TTAACAACAC ATGTAACTTT ACCACTTGCT
GGTGTAGCAG CAGCATCTAC TGCTGTAGGT ATGGAGTTTG AGGCTCAGAT GGATAAAGTT
GCAGCAATAT CAGGAGCAAC TGGAGAAGAT TTTAAAAAGT TAAAAGCTAA AGCAGAAGAA
ATGGGAGCTA AAACTAAATT TAGTGCTAGT GAAGCTGGTC AAGGCTTAGA ATATATGGCT
ATGGCGGGTT GGAAAACTGG CGATATGTTA AATGGTATAG AGCCAATTTT AAATTTAGCT
ATAGCTTCTG GGGAAGAACT TGGAACAACA TCTGATATAG TTACAGATGC TTTAACTGCG
TTTGGATTAA CTGCTAAAGA TGCTGGAATG TTTTCTGATG TTTTAGCAGC TGCATCATCT
AATGCTAATA CTAATGTTGG TATGATGGGT GAAACATTTA AATATGCAGC ACCAGTCTGC
GGAGCATTAG GTTATAATGC TAAAGATACA GCACTAGCAA TAGGATTAAT GGCTAACTCT
GGTATAAAAG CAAGTCAAGC TGGTACAGCA CTTAGAGCAG GATTAACTAA CTTAGTAAAA
CCTACAGATT CTATGGCTGC TGTAATGGAT AAATACGGTA TTTCATTAAA AGATAGTAAT
GGTAATATGA AGTCTTTCAA AACAGTAATG GAAGACTTAA GAACTAAATT TGGTAAGTTA
GATAAATCAA CTCAAGCAGC TGCTGTAAGT ACATTGTTTG GTAAAGAAGC AATGTCAGGT
TGGTTAGCAA TAATAAATGC ATCAAGTGCT GATTTTGATA AACTTTCTGG AGCTATTGAT
AAAAGTGAAG GTGCTACCGC ACAAATGGCA AAAACTATGA GTGAAAATGC TAAAGGTTCT
ATAGCAGAAA TGAAGAGTGC TTTAGAAGGA GCAGCAATAA AAGTTTTTGA AGCATTAGCA
CCTTCCATAA CTAAAGTTGC AAATGCAGTT TCTGATTTAG CTACTAAATT TAGTAATTTA
AGTCCAGAAA CACAAGAGTT TATTGTTAAA GCAGGATTGG CTGCTATGGC AGCTGGACCG
CTTATAAGTG GAGTAGGTAA GTTATCTACT GGAATTGGTG GTGTATTAAA AGTTGGTAGC
TTATTAACTA AGGGAATTGG AGCAGTTACA ACTGGAGCAG AAGTATTAAC TGGAGTAACT
GGAGCTGTCG GAGTAGCAGC TGAAGGAACT GCTGTTGCTA CTGGTGCAGC TGGAACTGCT
GTTGCTGGAT TTGGAGCAGT AGCATCTAGT GTTCTTTTAC CACTTGCTGG AGTAGTCGCA
GTAGTAGGGG CTGTTGGCTA TGCTAGTTAT AAAACAGCTA AATATTTAAA AGAAGATGCA
ACACCAGCTG TAGATTTATT TGCAGATAAA GCTGTTTATA GTACAGAAAC AATTGCTACA
AGTCATGGTA AAATGACCAT GCAAGTACAA ACTGATACTA TAAAAATATC TGAGTCTACT
AAAAAAAATG TACAATCTTA TTTAGATATG GATAAAAAAG CTAGTGATAG TTTAATGAAT
TTAAGAATGA ATAGTGATAA ATTTACTAAT GAAACAAAAG AAACTGTTCT AAAAAACTTT
GAAGATATGT CTAAAAAATC AAGCAGTTTA TCTGAAGAAC AAAGAAATGC AATGACAGTA
AACTTTAAGA AGTTAGTAAG CGATACTGGA ACTTTAACAC AAAAAAATAA AGATGAAATA
ATAAAACAAT ATACAGCTAT GGTTAATGGA ACTAAGAAGT TAACTGAAGA ACAAAAACAA
AAAACAATAA AAGATTTTAC TGATACTTTA AACCAGAGCG TTGGATTGTC TAAAAAGCAA
TCTATAGAAA TGCAGAAAAT ATATAAAGAT ATGAGTGAAA AAATTAAAGT TGGCATGGAT
AAAAAAAGAG AAGAAGAGCT TAAGAAGCAA AAAGAATTTT TTGATAAGTC TAATGCTTTA
AGTGAAAAAG AAGAAGCTGA AGCTATTAAA AAAACAGGTG AGTTTTGGGA AAAGCAAAAA
TCTAAAATTG ATGAAGGCCA AAAAAGAATA GAAATGATTT ATCAAAAAGC AGCTGAAGAA
CATAGAAAAA TTACAGAAGA TGAATTTAAA GCTATAAGTA GTATCCAACA TGGCATGAAA
GAGGATGCTG TTAAAACATT AAGTGATAAT GAAGTGGAAG CTAAAGTTAT ATTAGAGAGA
ATGAAGGGAA ATGATGAACG TATTACAGCA GAACAAGCTA GTCAACATAT CAAGGAATTA
AATAAATCTC GTGATGAAGC TATTAAAGCA GCAAATGAAG AATGTGATAA GCGTATAGCT
GAAATAATTA GAATGAGAGA TGAAACTGGC ACATTAACAG CAGAACAAGC TGATAAATGT
ATAGAAGATG CTAAAAGGCA AAGAGATGAA ACTGTAAGTG CAGCTGAAGA AACTAGAAAT
CAAGCTGTAG ATAAAATAGC TTCTATGAAC TCTAATATTA GAGATAGTGT AAATACTACT
ACTGGAGAAG TAAAATCTAA CTGGGATAAA TTAAAAGATT GGTGGGATAA TTGGCATCCT
GTCAAAAAAA TTTTTGAAAT TTTCACTAAA CATACAAGTG ATGGAAAATC AGCAGATCAA
AACTGGACTG GTAACTCATA TTTCAAAGGA GGATTTACAA CTCTACATGA AAGAGGATAT
GAATTATATG ATTTACCTTC AGGATCAAGA ATCTATAATC ATGAATCAAG TGAAGAAATG
GTTTTAGAAA CAGCTAGACA AACAGCTCAA GGAGTTATTG AAACAATGCT AGGAAATCAA
GAAGGAAATA CTGGTGATAT TATAATTCCA GTTTCTATAG CTGGTGAAGA AATTGATAGA
ATAGTAGTTC CTAGAGTAAG TAATAAACTA GCACAAAATA TAAGGGGAAG GAGATAA
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| Protein sequence | MSDLEKRITA KMVLDDSGYS NTLKGINATL RENKSELKAA TSGLNAFGKS TSNVERVQRA
FKDQLETQAK KVKVYKDSLK KANDTLEKNV ATRSKLVKSI SQEEAKLSSL KKKYGENNDA
VRNVEKRLEE YKEKLEKVDS SIESNSKRIQ SYSTQLNNAE AELNKAAAAA KKFNDEVAKN
NGLKTTSKKL EEASSNFKKF GEGAKKVGSS LTTHVTLPLA GVAAASTAVG MEFEAQMDKV
AAISGATGED FKKLKAKAEE MGAKTKFSAS EAGQGLEYMA MAGWKTGDML NGIEPILNLA
IASGEELGTT SDIVTDALTA FGLTAKDAGM FSDVLAAASS NANTNVGMMG ETFKYAAPVC
GALGYNAKDT ALAIGLMANS GIKASQAGTA LRAGLTNLVK PTDSMAAVMD KYGISLKDSN
GNMKSFKTVM EDLRTKFGKL DKSTQAAAVS TLFGKEAMSG WLAIINASSA DFDKLSGAID
KSEGATAQMA KTMSENAKGS IAEMKSALEG AAIKVFEALA PSITKVANAV SDLATKFSNL
SPETQEFIVK AGLAAMAAGP LISGVGKLST GIGGVLKVGS LLTKGIGAVT TGAEVLTGVT
GAVGVAAEGT AVATGAAGTA VAGFGAVASS VLLPLAGVVA VVGAVGYASY KTAKYLKEDA
TPAVDLFADK AVYSTETIAT SHGKMTMQVQ TDTIKISEST KKNVQSYLDM DKKASDSLMN
LRMNSDKFTN ETKETVLKNF EDMSKKSSSL SEEQRNAMTV NFKKLVSDTG TLTQKNKDEI
IKQYTAMVNG TKKLTEEQKQ KTIKDFTDTL NQSVGLSKKQ SIEMQKIYKD MSEKIKVGMD
KKREEELKKQ KEFFDKSNAL SEKEEAEAIK KTGEFWEKQK SKIDEGQKRI EMIYQKAAEE
HRKITEDEFK AISSIQHGMK EDAVKTLSDN EVEAKVILER MKGNDERITA EQASQHIKEL
NKSRDEAIKA ANEECDKRIA EIIRMRDETG TLTAEQADKC IEDAKRQRDE TVSAAEETRN
QAVDKIASMN SNIRDSVNTT TGEVKSNWDK LKDWWDNWHP VKKIFEIFTK HTSDGKSADQ
NWTGNSYFKG GFTTLHERGY ELYDLPSGSR IYNHESSEEM VLETARQTAQ GVIETMLGNQ
EGNTGDIIIP VSIAGEEIDR IVVPRVSNKL AQNIRGRR
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