| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2505 |
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| Symbol | |
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| ID | 4206227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2722262 |
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| End bp | 2723488 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642567055 |
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| Product | NupC family protein |
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| Protein accession | YP_699752 |
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| Protein GI | 110803704 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.542894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAGGT TTATTGGTGT AATCGGTCTT ATTTGTATTA TTGGTATAGC TGTTCTTTTT
TCTGAAAATA GAAAGAAGAT CAACTGGCGC TTGGTTGGAA CAGGTCTTTT ATTACAAATT
ATCTTCGCAT TACTAATTCT AAAAGTTCCT GCTGGTAGAG CAGTTTTTGA ATGGATTAGT
AATGGAATAA CTAAATTATT AGATTTTACT AAAGAAGGTA GTTCATTCTT ATTTGGCCCA
TTACTTGATA CAGACAAATT CGGTATGATA TTTGCTCTAC AAGTTTTACC AACAATTATC
TTCTTCTCAT CATTAATGAG TGTACTTTAT CATTTAGGTA TAGTTCAAGT TGTTGTAAAA
GTTATTGCTA AAGGGGTTGC TAAAGCATTA GGAACAAGTG GTGCTGAAAC TTTCAGTGCA
GTTGGTAATA TCTTCTTAGG CCAAACAGAA GCTCCTCTAC TAGTTAAACC ATACATAAAG
AACATGACTA AATCAGAAAT ATGCGCAATT ATGGTAGGTG GTATGGCTAC TGTTGCTGGT
GGTGTTATGG CTGGTTATGT AGCTATGGGT GTTAACGCTG GTAACTTATT AGCAGCATCA
ATCATGGCAG CTCCTGCCGG ATTAATATTA GCTAAAATAC TAGTTCCAGA AACTGAAGTT
CCTGAAACTA AAGGTGGCGG AACTTTAGAC CTTAAAGTTG AAAGTGAAAA TGTTATTGAA
GCTGCTGCAA ATGGTGCTTC AGAAGGTTTA GGATTAGCTT TAAATGTTGG TGCTATGCTT
CTTGCATTCG TTGCTCTTAT AGCTATGATT AATGCTTTAT TCGGAGCAAT AGGTGGAATA
TTTGGTGCAC CTTGGTTAAG CTTAAACTGG ATTCTTGGTA GATTATTCTC TCCATTAGCA
TTTATAATGG GAGTTCCAAC TAAAGATGTT TTCGTAGCTG GAGACTTACT AGGAATTAAA
TTAGCAGTTA ATGAATTCTT AGCTTACTCA CAATTATCAA ACTATATAGC AAATGGTACT
TTAGAACCTA AAACTATAAT GATATTAACT TATGCTCTTT GTGGATTTGC TAACTTAAGT
TCAGTTGCTA TACAATTAGG TGGTATTGGT GGATTAGCTC CAGAAAAGAA ACCAACTATA
GCTAAGTTAG GATTTAAAGC ACTTTTAGGT GGTGTATTAG CTACTTGTAT GACAGCTACT
ATAGCAGGTA TCTTATTTAG TGCTTAA
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| Protein sequence | MDRFIGVIGL ICIIGIAVLF SENRKKINWR LVGTGLLLQI IFALLILKVP AGRAVFEWIS
NGITKLLDFT KEGSSFLFGP LLDTDKFGMI FALQVLPTII FFSSLMSVLY HLGIVQVVVK
VIAKGVAKAL GTSGAETFSA VGNIFLGQTE APLLVKPYIK NMTKSEICAI MVGGMATVAG
GVMAGYVAMG VNAGNLLAAS IMAAPAGLIL AKILVPETEV PETKGGGTLD LKVESENVIE
AAANGASEGL GLALNVGAML LAFVALIAMI NALFGAIGGI FGAPWLSLNW ILGRLFSPLA
FIMGVPTKDV FVAGDLLGIK LAVNEFLAYS QLSNYIANGT LEPKTIMILT YALCGFANLS
SVAIQLGGIG GLAPEKKPTI AKLGFKALLG GVLATCMTAT IAGILFSA
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