Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1997 |
Symbol | |
ID | 4205634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2202859 |
End bp | 2204163 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566547 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_699306 |
Protein GI | 110803412 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTG CATTTGCTAC ACTAGGGTGT AGAGTTAATA CATATGAATC AGAAGCGATG ACTGAAAAAT TTGTTAGGGA AGGCTATGAA GTTGTAGATT TTAATGAAAT GGCAGATGTG TATGTAGTTA ATACTTGTAG CGTAACTAAC ATGGGAGATA AGAAATCAAG ACAAATAATA GGAAGAGCTA GAAGACAAAA TCCAGAGGCT ATTATAGCTG TAGTTGGATG TTATGCTCAA ATAGCACCTA CAGAGGTTTC AGGAATTGAA GGTGTAGATG TAGTTTTAGG TTCAAGAAAT AAAGGTGAAA TAGTTTATTA TGTAAATAAG GCTAGAGATG AAGGCAAGCA ACAAGTTAAG GTTGGCGCTG TTTTAAAGAA TAAAGTTTTT GAGGACCTAA AAATTGAAGA GTATAATAAT AAAACTAGAG CTTTCTTAAA AATACAAGAT GGATGTAATA GATTCTGTGC TTATTGCTTA ATTCCATATA CTAGGGGTTC TGTTTGTTCA AAAGACCCTA AGAAGGTTTT AGATGAAATA AGAAGCTTAG CAGAGCATGG ATTTAAAGAA ATAATATTAT CAGGAATTCA TACAGCATCT TATGGCGTTG ATTTAGATGA AAAAGTAACA TTAGTTGATT TACTAGAAGA GATAGAAAAA ATCGATGGAA TAGAAAGAGT TAGAATAGGT TCAATAGACC CTACATTCTT TACAGAGGAT GTTGTAAGAA GAATCTTAGC TCTTAAAAAA CTATGTCCTC ATTTCCACTT ATCACTTCAA AGTGGATGTG ATGCTACTTT AAAAAGAATG AATAGAAGAT ACACTGCTAA AGAGTATGAA GATATAGTAA ATCTTTTAAG AGATAAAATA GAAGATGTTT CTATAACAAC AGACGTAATT GTTGGTTTCC CTGGAGAAAC TGATGAAGAG TTTAAAGAGA CTTATGAATT CTTAAAGAGA ATAGCTCTTT CAAAAACTCA CATATTCAAA TATAGTCCTA GAAAAGGTAC TAGAGCAGAG AATATGGAAA ATCAAGTTGA TGGAAATAAG AAAGACGAAA GAAGTAAAAA ACTTATTGAA TTAAATAGAA TTAATGAAAA AGCCTTTGCT GAAAAATATA TAGGTGAAGT TATTGATGTT TTATTTGAAG AAGAAGTTGA ATTAGGAAGT GGAGTTTACA CTGGATATAC AAGAAATTAT ATAAAGGTAA ATGCCAAGGC TGATTGCAAC GTTTCAGGTA AAATATTAAA TGTAAAGATT AATTCTTTTG AGGGAGAAGT AGCAGAGGGC GAAATAGTAT TATAA
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Protein sequence | MKVAFATLGC RVNTYESEAM TEKFVREGYE VVDFNEMADV YVVNTCSVTN MGDKKSRQII GRARRQNPEA IIAVVGCYAQ IAPTEVSGIE GVDVVLGSRN KGEIVYYVNK ARDEGKQQVK VGAVLKNKVF EDLKIEEYNN KTRAFLKIQD GCNRFCAYCL IPYTRGSVCS KDPKKVLDEI RSLAEHGFKE IILSGIHTAS YGVDLDEKVT LVDLLEEIEK IDGIERVRIG SIDPTFFTED VVRRILALKK LCPHFHLSLQ SGCDATLKRM NRRYTAKEYE DIVNLLRDKI EDVSITTDVI VGFPGETDEE FKETYEFLKR IALSKTHIFK YSPRKGTRAE NMENQVDGNK KDERSKKLIE LNRINEKAFA EKYIGEVIDV LFEEEVELGS GVYTGYTRNY IKVNAKADCN VSGKILNVKI NSFEGEVAEG EIVL
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