| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1668 |
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| Symbol | uppS |
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| ID | 4206409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1864600 |
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| End bp | 1865361 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566218 |
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| Product | undecaprenyl pyrophosphate synthase |
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| Protein accession | YP_698983 |
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| Protein GI | 110803535 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.225287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATT TTTTTAGTAA AAAAGGAAAT GAAGATTCAG AAGAAATAGT TCTAATTGAA
GATAAAATGC CAAAGCATAT TGCCATAATA ATGGATGGTA ATGGAAGATG GGCAAAAAAA
AGAGGTCTTC CAAGAACTAT GGGACATAGA GCTGGGGTTA AGACTATAAA AACTATTGTA
AAAGAATGCG ATAAATTAGG AGTGAAATAT TTAACTTTAT ATGCTTTCTC TACTGAAAAC
TGGAAAAGAC CAGAAGATGA AGTTAATGCT CTTATGAAGT TAGTTGTTGA ATTTATAAAA
AATGAAATTG ATGAACTTCA TCAAAACGGA GTAAGGGTAC AAACTATAGG TGATTTATCA
AGATTCCCAG AAGAACCTAA AAAAGCTATA CTTTGGGCTA TGGAAAAAAC TAAAGATAAC
ACTGGAGTAG TTTTAAGCTT AGCATTAAAT TATGGTGGAA GAAATGAAAT AGTTAGAGGT
ATAAAATCTG TAATAGAAGA TGTTAAAGCG GGCAAAATAA GTATAGATGA TATAAACGAA
GATATGTTTA ATGACTATCT TTATACTAAA GGAATGCCAG ATCCAGATCT TATAATAAGA
CCAAGTGGAG AACAAAGACT TAGCAACTTC TTATTATGGC AATGTGCATA CTCAGAATTT
TGGTATTCTC AAATAAACTG GCCAGATTTT AATGGTGAAG ATTTAAGAAA AGCTATTTTT
GATTATCAAA ATAGAGATAG AAGATTTGGT GGAATTAAAT AA
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| Protein sequence | MLDFFSKKGN EDSEEIVLIE DKMPKHIAII MDGNGRWAKK RGLPRTMGHR AGVKTIKTIV
KECDKLGVKY LTLYAFSTEN WKRPEDEVNA LMKLVVEFIK NEIDELHQNG VRVQTIGDLS
RFPEEPKKAI LWAMEKTKDN TGVVLSLALN YGGRNEIVRG IKSVIEDVKA GKISIDDINE
DMFNDYLYTK GMPDPDLIIR PSGEQRLSNF LLWQCAYSEF WYSQINWPDF NGEDLRKAIF
DYQNRDRRFG GIK
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