| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1297 |
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| Symbol | |
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| ID | 4206149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1465697 |
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| End bp | 1467154 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565853 |
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| Product | putative amino acid antiporter/acid resistance protein |
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| Protein accession | YP_698619 |
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| Protein GI | 110803782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00910] glutamate:gamma-aminobutyrate antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00362427 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAGG AAGGAACAAC AAAAAAATCA TTGACACTTT TTGGATTCTT CGCAATGACA
GCCTCTATGG TTATGGCTGT ATATGAATAT CCTACTTTTG CAACATCTAA ATTACACTTA
GTATTTTATC TACTTTTAGG AGGTTTCTTA TGGTTTATTC CAGTAGCTTT ATGTGCTGCT
GAAATGGCAA CTGTAGATGG CTGGGAAAAA GGTGGAGTTT TCACTTGGAC TGGAAAGAAT
TTAGGTAAAA AATATGGTTT TGCAAACTTA TTTTTTGAAT TCTTTGAAAT AACAGTTGGA
TTTGTAACCA TGATTTATTT CATCCTTGGG GCTTTATCAT ATGTATTTGA CTGGCCAGCA
CTAAATAGTA ACCCAATGAT AAAATTTATA GGTGTATTAG TAATCTTTTG GATTTTAGCA
TTATCCCAAT TTGGAGGAAC AAAATATACT GCTAAAATAG CTAAAATAGG TTTTATAGTA
GGAATACTTT TACCAGCAGC TATTTTAATA ATATTAGCTC TTGTATATAT AATTCAAGGA
AACCCTATAT ATATATCAAG TAAAGATACT TTTGTTCCAG ACTTTACAAA GGTAAATACC
TTAGTTGTAT TTGTATCCTT TATATTATCT TACATGGGTG TAGAAGCATC AGCTACTCAT
GCAAATGAAA TGGATAATCC AAAGAAAGAA TATCCATTAG CAATGCTTTT ATTAGTTATA
GTAGCAATTG TTGTTAGTAC TTTAGGAGGT CTTGCAATAG CAGCAGTTAT TCCTCAAAAT
CAAATAAATT TAAGTGCTGG GGTAGTTCAA ACATTTGTTG TTTTATTAGG TCACTTTACA
GCTAATAATA CAATTTTAGT TAAGATAATA GCTTTATTAC TTGCCTTTGG TGTAATTGCA
GAAGTAAGTT CATGGGTTGT AGGACCAACA AGAGGAATGA TTATAGCAGC TGAAGAAGGC
GCTATTCCAA AATCATGGGC TAAAACAAAT GAACATGACG TGCCAGTTTA CTTAGTTATA
GCACAAGGTA TAATAGTTAG TATATGGGAT GCTGTTTTAA CCTTTGGGGC AGGTGGAAGT
AACCTTTCAT TCTTAGCAGC AATGTCTTTA ACAGTTGTAA TTTATTTAAG TGGATATATT
CTATTTTTCG TAGGATATAT AAAAGCTATA TTAGGAGAAG GATTAAATGG TGCTTATCAA
ATGCCTGGGG GAAAACCAGT TAAGATTATA GTAGCCATAA TTGGACTTGC AACTTCTATA
TTTGCATTCT TTATATCCTT TGTCCCACCA ACATCAATTG CAGGAAATGC AGTTCAATCA
CATGAATATA TGTTGATGCT TATTATAAGT TATGTAATAT CATTAATATT ACCATTTGCT
ATTTATGATT TATGTCAAAA ATACATGCAT TCTCATGAAG GAAATATCCA TCATATAGTA
GTAGGTCATA AACATTAA
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| Protein sequence | MKQEGTTKKS LTLFGFFAMT ASMVMAVYEY PTFATSKLHL VFYLLLGGFL WFIPVALCAA
EMATVDGWEK GGVFTWTGKN LGKKYGFANL FFEFFEITVG FVTMIYFILG ALSYVFDWPA
LNSNPMIKFI GVLVIFWILA LSQFGGTKYT AKIAKIGFIV GILLPAAILI ILALVYIIQG
NPIYISSKDT FVPDFTKVNT LVVFVSFILS YMGVEASATH ANEMDNPKKE YPLAMLLLVI
VAIVVSTLGG LAIAAVIPQN QINLSAGVVQ TFVVLLGHFT ANNTILVKII ALLLAFGVIA
EVSSWVVGPT RGMIIAAEEG AIPKSWAKTN EHDVPVYLVI AQGIIVSIWD AVLTFGAGGS
NLSFLAAMSL TVVIYLSGYI LFFVGYIKAI LGEGLNGAYQ MPGGKPVKII VAIIGLATSI
FAFFISFVPP TSIAGNAVQS HEYMLMLIIS YVISLILPFA IYDLCQKYMH SHEGNIHHIV
VGHKH
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