Gene CPR_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0930 
Symbol 
ID4206485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1064160 
End bp1064630 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content32% 
IMG OID642565488 
ProductISCpe7, transposase 
Protein accessionYP_698254 
Protein GI110803460 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00303612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTATTCA TAAACGGTAA AAAGTATTAT TTATGGCTTG CTATAGACTC TGAAACACGT 
TTTGTATTAG CTTTTCATCT AACACAAGCA CGTGATTCTG ATGCAGCATT TATTCTTATG 
AATCAAGCTA AATCTATGGG TAAACCTAAG CACTTTATCA CAGATAGACT ACCGTCCTAT 
AATGAAGCAG TTAAAACCGT ATTAAACGAA AGCACTCATA TTCCTGTACC ACCTATGTCT 
AGTGATACAA ATAATAACTT AATAGAGTCT TTCAATAAAA CATTTAAAGC ATGGTATAAA 
GCTAAAAAAG GTTTTAATTC TTTTGAAAAA GCTAATAACT TAATATACAT GTTTATATTT 
CACTATAATT TCATTAGACC TCATGGATCA TTAAACGGCT CTACGCCTGC CGAAGTAGCC 
GGTTTTAGTA CTAATGATTC TAGTAAACAT AATTGGTTTA TTGCTGCTTA A
 
Protein sequence
MVFINGKKYY LWLAIDSETR FVLAFHLTQA RDSDAAFILM NQAKSMGKPK HFITDRLPSY 
NEAVKTVLNE STHIPVPPMS SDTNNNLIES FNKTFKAWYK AKKGFNSFEK ANNLIYMFIF 
HYNFIRPHGS LNGSTPAEVA GFSTNDSSKH NWFIAA