| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0265 |
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| Symbol | |
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| ID | 4204417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 323753 |
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| End bp | 325051 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642564823 |
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| Product | NlpC/P60 family protein |
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| Protein accession | YP_697595 |
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| Protein GI | 110802693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)
[COG3883] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.894472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA AAATAATTTC AACAGTTCTT GCTGCTACAA TGACATTTGG AGTAGGACAC
AGTGTATTCG CAACTCCACT TACAGATGAT CAAAAGCAAC AAATGGAACA TAATCAAGAT
AAATATGCAG ATATTAATAG TAAGATAAGA GAGTTAGAAG ATAAGATAGA TGGATTATCA
GCTAAAATAG AACCTTTATT TTTCCAAGTA GAAAAAAATA AAGAAGAAAT ATCTAAGACA
GAGGAATCAA TTTCAACAGT TAAAGTTCAA ATTGAGGAAT CAAAGAAAAA AATAGAAAAA
CAACAAGAAG TTTTAGGTCA AAGAATAAGA GCAACATATA AAAGTGGTGG ACAAGCAAAC
TACTTAACTG CTTTATTAGA TTCTAATGGA ATTGGTGACT TCTTATCAAG AGTACAAGCT
ATAAGCAAAG TAATGGGTAT GGATAAGCAA GTTATTGATG AATTAACTTC TGAAAAGGAA
AAACTTGATA GTGAAGTTAA GGAATTACAA GATAAGACTA CAGAATTAAA TAAGCTTAAT
TCAGAGACTC AATCAAAAAT AGATGAGTTA AACAAAATGA AAGCTGAGCA AGAAGGCGTT
ATAAAAGACA TGAAAGCTGA GCAAGAAAAA GTTGTTGGAG AATTAGCACC ACTAGAAAGA
CAGTTAATGG AGCCTTGGAC TTCTAAAATA AATTCAAATA GTTCATTAAA TGATTTAAAT
CAGGCTGTGA CAGCCTTAAG AGGTTTAAGA AATCAAATAA AAACTCCAGA GGTAGATGCA
GAAGCTGTTC AAGCTATAGA AAAAGCTAAA GATTTAATAG AAACTAAAAA AGCAGAGGAA
GCAGTAAGCA GTGCACCTAA CAGAGGTGGA GATGTTAATA CTGGTGGAAG CTCATCTTCA
GCTAGTAATG GAAGTTCATC ATCAAATAGT GGAAGCACAG TAGCTCCACC AAGTGAAGGG
GCGGCTTCAG CAGTAGTATC ATATGCATAC CAATTCATAG GAAGACCATA TGTATTTGGT
GCAACTGGTC CTGATACATT TGATTGTTCA GGATTTACTA GCTATGTATA TAGAAATGCA
GTAGGTAGAG AAATTACTAG AACTACTTAT ACACAAATAA ATCAAGGTAG ACCTGTATCA
AGAGATCAGT TACAACCAGG AGATTTAGTA TTTACTAATG GTGTAGGACA CGTTGGAATA
TATGTAGGTG GTGGACAAAT GATTCACGCT GCTAGACCAG GTGTTGGTGT AATAGTAGGC
CCTATATATA ATTTCTCATC AGCGAGAAGA ATATTATAA
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| Protein sequence | MKKKIISTVL AATMTFGVGH SVFATPLTDD QKQQMEHNQD KYADINSKIR ELEDKIDGLS
AKIEPLFFQV EKNKEEISKT EESISTVKVQ IEESKKKIEK QQEVLGQRIR ATYKSGGQAN
YLTALLDSNG IGDFLSRVQA ISKVMGMDKQ VIDELTSEKE KLDSEVKELQ DKTTELNKLN
SETQSKIDEL NKMKAEQEGV IKDMKAEQEK VVGELAPLER QLMEPWTSKI NSNSSLNDLN
QAVTALRGLR NQIKTPEVDA EAVQAIEKAK DLIETKKAEE AVSSAPNRGG DVNTGGSSSS
ASNGSSSSNS GSTVAPPSEG AASAVVSYAY QFIGRPYVFG ATGPDTFDCS GFTSYVYRNA
VGREITRTTY TQINQGRPVS RDQLQPGDLV FTNGVGHVGI YVGGGQMIHA ARPGVGVIVG
PIYNFSSARR IL
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