Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0185 |
Symbol | cbiO |
ID | 4205067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 225942 |
End bp | 226799 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564739 |
Product | cobalt transporter ATP-binding subunit |
Protein accession | YP_697521 |
Protein GI | 110801709 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACT ATATATTAAA AGTAGAAGAG CTTAATTATA ATTATTCAGA TGGAACTCAT GCTCTAAAAG GTATAAATAT GAATATAAAA AGAGGAGAGG TTACGGCTAT ATTAGGTGGA AATGGTGTTG GAAAATCAAC TTTATTTCAA AACTTTAATG GTATATTAAA ACCTTCTTCA GGAAGAATAC TTTTTGATAA TAAACCTATA GATTATTCAA GAAAAGGAAT AATGAAACTT AGAGAATCTA TAGGAATTGT TTTTCAGGAT CCTGATAATC AACTTTTCTC AGCAAGTGTT TACCAAGATG TTTCCTTTGG TGCTGTTAAT ATGAAATTAC CAGAAGATGA AATAAGAAAA AGAGTAGATA ATGCACTAAA AAGAACTGGT ATAGAACACT TAAAAAATAA GCCAACTCAT TGTTTAAGCT TTGGTCAAAA GAAAAGGGTA GCCATTGCAG GGGTACTAGT TATGGAGCCA AAGGTTTTAA TACTAGATGA ACCAACGGCA GGTTTAGATC CAATGGGCGT TTCAGAGATA ATGAAGCTAT TAGTAGAAAT GCAAAAGGAG CTTGGCATAA CAATAATAAT AGCAACTCAC GATATAGATA TTGTTCCTTT ATATTGTGAT AATGTTTTTG TTATGAAAGA AGGAAGAGTA ATATTACAAG GAAATCCTAA AGAGGTATTC GCTGAAAAAG AAGTTATAAG AAAAGTTAAC TTAAGATTAC CTAGAATCGG ACATCTTATG GAGATTCTAA AAGAGAAGGA TGGCTTTGTA TTTGATGAGT TAGATTTAAC TATTGGACAG GCTAGAAAGA CAATAAATTC TTGGAAAAAC AAAATTTTTA ATGATTAA
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Protein sequence | MEDYILKVEE LNYNYSDGTH ALKGINMNIK RGEVTAILGG NGVGKSTLFQ NFNGILKPSS GRILFDNKPI DYSRKGIMKL RESIGIVFQD PDNQLFSASV YQDVSFGAVN MKLPEDEIRK RVDNALKRTG IEHLKNKPTH CLSFGQKKRV AIAGVLVMEP KVLILDEPTA GLDPMGVSEI MKLLVEMQKE LGITIIIATH DIDIVPLYCD NVFVMKEGRV ILQGNPKEVF AEKEVIRKVN LRLPRIGHLM EILKEKDGFV FDELDLTIGQ ARKTINSWKN KIFND
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