Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0137 |
Symbol | |
ID | 4206168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 167240 |
End bp | 169240 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642564692 |
Product | hypothetical protein |
Protein accession | YP_697474 |
Protein GI | 258676974 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAATTAA GTAAATTAAG AATAAAAAAT TATAAGTCAT TTAAAGACTC TGGAACTATA GAAATTAAAG GAAATATATT TGCATTAATT GGACAAAATA ATGCAGGAAA ATCAGCAATA ATGGATGCTA TACAGGTGTT TTTCCCAAAT TGTAAAAAGA GTGCTAATTC AGAAAATTTT CATAAGTTTA CTAAAGAGGA TATATCAATT GAATTATGGT TTTCGAAAGT TAATTCTGAT TATTTAGAAA ATAAATTATT TCAAGACAAA ATAAAAAAAC AAAATGAAGT AATAAAGAAA TGCATAGAAA CAGAAAAATA TGATAAAGAA TTAAAAAAAT TAGACGAAAT AAGAGAAAAA GAATTAAATA AATGTATTTT AAAATATGGG ATTGAAAATG AGGAACTGTA TGTTAAAAAA ATTATTCCTA AAGAAAGTAA AGCTTTTTAT ATATTAAAAA ATAATGATAA AATTAGTGAA GCTGATTTGA AAAAAATTTT ACCTGAATTA AAAATTATTC CAGCAATAAG GGATCCTAAA AATGAGAGTA CTGCTGGTAC AAATTCATAT TTAAAGGATT TAATACAGAT GCTTGATGAA GAAGCTCAAA CAGAAATAAT GATGGAAGAT AAAAAACTTA CATATAAAGA ACTTAATGAG GTTTTATCCG AAGAAACATC TAAAAGAAGT AAAGAATTAT CTTCTAAGAT AACTAATTAT TATAGCAAGG CAATAGGAAG TAGTGATTTT GAAGTTAAAG TTAATTCATC TGTAAATATA AGTAAAGGAA CTAATTATAG TACGGAGCTT ATAGATAATA CAACAAATAT TAAAGCAGAT ATTCTAGATT GTGGTACTGG TTACCAAAGT ATGGTTATAT TGGCTTTGTT AGAGACTTAT GTTGAAATAG CACATACTAA TAATAATTAT ATTTTAATTA TTGAAGAACC AGAGGTGTAT TTACATCCAC GTTTACAGAG AAAAATGATA GATACATTAC TTAGGGTTTC CGAGCATAAT CAAGTGATTT TTACAACTCA TTCTCCAATA ACAATAAGTA AGTTAAATAG CTTAGATGTA AAATTAGTTG AAAGAGAATA TGGTGAAGCT AAAATAAAAA ATTCTAGCGT AAAAGAAATA ATTGATGAGT TAGGAGTAAG AGCAGATGAT TTTTTACATA GTAAAGGAAT TATATTTGTT GAAGGAAAAG ATGACGAGAT TGTTATAAGA GAATTATTAA AGAAATTAGA TAAATGTATT ATTGATAAAA TAAATATAAT ACAAGCTGTG GGGTGTAGTA ATTTTAAGTG GTATGCTAAT GCCGAAATAT TAATTAATAA AAATTTTGAT ATACCTACAC TAATATTAAG AGATTCAGAT GTTGAAAGAC CAGAAAAATT AAAAAAAGAC TTAGTTGAAG ATATAATAAA TTCATTTATT AATACACCAC AATATGCTAG GTACAATCAA GATGAAAAAG AAGAAATAAA AACAAAGATA AATGATGCAA TTAAAGTTTT ATCACAACAT TCATTAGAGT ATTATTTTAT TAATCCAAAC TTATTAGTAC AATTTTATGA ATGTAAGGTA GAGTTAGAAA ATGCTATAAA ATGTTATAAT TGTAAATATA ATGATAAAAT GCAAGAAGGA CTAAGTGGAA AAGATATTGA AGGTAAAGTA CAAAATTATT ATCAGCCAAA ACGATTTTTG GAAGGATATC CAGATAAGCC AAGTGATATA GCTAAAAATT TAGAACCTAA ATTTATTGAG GAGTGGGAAT CTTATAAAGA AAGTTGTAAT TGTGAAATTA GCGAATTATA TGGAATTGAT AATTTTATAA AAATAAGAAA TGTTTTAAAA AATAATATTA ATGATTTTAA TAAGAGTAAT GATGTTTTTA AAGAGATAAT AAATATATAC GATATAAAAT ATCTAGAAGA AAATGGATTA AAAGAATTAA TTGATATTCT TAAAGAATTT ATAATAAAAG TTAAAATTTA A
|
Protein sequence | MKLSKLRIKN YKSFKDSGTI EIKGNIFALI GQNNAGKSAI MDAIQVFFPN CKKSANSENF HKFTKEDISI ELWFSKVNSD YLENKLFQDK IKKQNEVIKK CIETEKYDKE LKKLDEIREK ELNKCILKYG IENEELYVKK IIPKESKAFY ILKNNDKISE ADLKKILPEL KIIPAIRDPK NESTAGTNSY LKDLIQMLDE EAQTEIMMED KKLTYKELNE VLSEETSKRS KELSSKITNY YSKAIGSSDF EVKVNSSVNI SKGTNYSTEL IDNTTNIKAD ILDCGTGYQS MVILALLETY VEIAHTNNNY ILIIEEPEVY LHPRLQRKMI DTLLRVSEHN QVIFTTHSPI TISKLNSLDV KLVEREYGEA KIKNSSVKEI IDELGVRADD FLHSKGIIFV EGKDDEIVIR ELLKKLDKCI IDKINIIQAV GCSNFKWYAN AEILINKNFD IPTLILRDSD VERPEKLKKD LVEDIINSFI NTPQYARYNQ DEKEEIKTKI NDAIKVLSQH SLEYYFINPN LLVQFYECKV ELENAIKCYN CKYNDKMQEG LSGKDIEGKV QNYYQPKRFL EGYPDKPSDI AKNLEPKFIE EWESYKESCN CEISELYGID NFIKIRNVLK NNINDFNKSN DVFKEIINIY DIKYLEENGL KELIDILKEF IIKVKI
|
| |