| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0119 |
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| Symbol | |
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| ID | 4204138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 149643 |
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| End bp | 150413 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642564674 |
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| Product | ABC transporter |
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| Protein accession | YP_697456 |
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| Protein GI | 110802668 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.393598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAAAG AGGTTTTAAA GGTAAGTAAT ATAGAAAAGT ATTATGGTAA AAAAGGAAAT
GTTACAAAGG CCATTAATGA TATTAGTTTT ACTGTTTCAG AAGGGGAGTT TGTTGGAATA
ATGGGGGCTT CAGGAAGTGG TAAAACAACA CTTTTAAATT GTATATCAAC CATAGATAAG
GTAACTAGTG GTCATGTATA TTTAGAGGGA GAGGATGTTA CAAGCTTTAG TTCAAAAAAG
TTAGCTAAGT TTAGAAGAGA AAAAATAGGG TTTATATTTC AGGATTTTAA TCTTTTAGAT
ACCTTAACAG CTTACGAAAA TATAGCCTTA GCTCTTACAA TTCAAAGAGT GAATAATAAG
GAAATAGATA AAAGAGTAAG ACTCGTTGCA GAAGCATTAA ATATAAGTAA TGAGCTTAAT
AAATATCCTT ATGAAATGTC AGGGGGACAA AAGCAAAGAG TGGCATCAGC AAGGGCAATA
GTTACTAATC CATCTTTAGT ATTAGCTGAT GAACCAACAG GAGCCTTAGA TTCAAAGGCA
GCTACCATGC TTCTTGAAAG CTTAGAAGAT TTAAATAAGA ATTTAAATGC AACAATTATG
ATGGTAACTC ATGATGCTTT TACAGCAAGT TATGCAAATA GAATTTTATT TATTAAGGAT
GGAAAGATAT TTAATGAACT TATAAAAGGA ACTGATTCTA GAAAAGAATT TTTCAATAGA
ATAATTGAAG TCATAACTCT TCTTGGAGGT GACAGTAATA ATGTATTTTA A
|
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| Protein sequence | MGKEVLKVSN IEKYYGKKGN VTKAINDISF TVSEGEFVGI MGASGSGKTT LLNCISTIDK
VTSGHVYLEG EDVTSFSSKK LAKFRREKIG FIFQDFNLLD TLTAYENIAL ALTIQRVNNK
EIDKRVRLVA EALNISNELN KYPYEMSGGQ KQRVASARAI VTNPSLVLAD EPTGALDSKA
ATMLLESLED LNKNLNATIM MVTHDAFTAS YANRILFIKD GKIFNELIKG TDSRKEFFNR
IIEVITLLGG DSNNVF
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