Gene CPR_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0053 
Symbol 
ID4205445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp59420 
End bp60064 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content28% 
IMG OID642564596 
Productantibiotic ABC transporter, ATP-binding protein 
Protein accessionYP_697395 
Protein GI110803070 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.633945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA GAAATGTTGT AGAAATTTCT AACTTAACAA AAGATATAAA AGGTACAAAA 
GTACTTAATA AAGTTAATTT ACAACTTGAG AGTGGTAAGG CATATGGAAT AGTTGGTAGG 
AATGGATCAG GAAAAAGTAT GTTATTTAAA GCTATTTGCG GTTTAATTAA TACAACAGAA 
GGTAGTATAA CTGTGTTCGA TAAGGTTATA AAAAATGGAA GTTTTCCAGA TGATGTAGGA 
ATGATTATTG AAAATCCTGG ATTTTTACTT CAATATTCTG CTTTTAAAAA TTTAAAAATA 
TTAGCTAGTA TAAACAATAA AATAAGTGAT GAAAGAATAA AAGAAACAAT CGCTTTAGTG 
GGGTTAGATC CTGAAGATAA AAAAATAGTA AAGAAATTTT CTTTAGGTAT GAAACAAAGA 
TTAGGTATTG CCCAAGCTCT TATGGAGAAT CCTAAACTAT TGATACTTGA TGAACCTATG 
AATGGTCTTG ATTCAGAAGG TGTAAAACAA ATTAGAGAAA TTTTATTAAA GCTAAAGTCT 
AACTCTGTTA CAATCTTATT AGCAAGTCAT AACAGTGACG ATATAGATGA AATATGTGAT 
TGTGTATACA CTATGGAAAA TGGAGTTTTG AGCGCAAGAA TATAA
 
Protein sequence
MGNRNVVEIS NLTKDIKGTK VLNKVNLQLE SGKAYGIVGR NGSGKSMLFK AICGLINTTE 
GSITVFDKVI KNGSFPDDVG MIIENPGFLL QYSAFKNLKI LASINNKISD ERIKETIALV 
GLDPEDKKIV KKFSLGMKQR LGIAQALMEN PKLLILDEPM NGLDSEGVKQ IREILLKLKS 
NSVTILLASH NSDDIDEICD CVYTMENGVL SARI