| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2783 |
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| Symbol | |
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| ID | 4200963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3045781 |
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| End bp | 3046761 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638083651 |
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| Product | putative dihydrouridine synthase |
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| Protein accession | YP_697155 |
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| Protein GI | 110799132 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT CAAACATAGT TTTAGAAAAT AATGTTTTCT TAGCACCTAT GGCAGGGGTT
ACAGATATAT CTTTTAGGGG ATTATGTAAA GAGATGGGTG CAGGAATTGT TTGCACTGAA
ATGGTTAGTG CAAAGGCATT GTACTATGGG AGTGAAAATA CAAAAGAATT AATGAGAATT
GCAGATGAAG AAAAACCGGT ATCTTGTCAG ATGTTTGGAA ATGATCCAGA GATAATGGCT
TATGTCACTG AGAAGCATTT TAATACAAAT GATGATATAT GTATAATAGA TGTGAATATG
GGATGTCCTG CACCTAAGAT AGTAAAAAAT GGTGAAGGTT CAGCCTTAAT GAAAAATCCT
AAATTAGCTT ATGAGATCAT GAGTAGCATA AAAAAAGTTG CAACAAAGCC TGTAACAGTT
AAGTTTAGAA TGGGTTTTGA TGAAGAAAAT ATAAATGCTG TTGAGTTTGC TAAAATCATG
GAAGAAGCAG GAGTAGATGC CATTGCTGTA CATGGAAGAA CTAGGGCTCA AATGTATGAA
GGAAAAGCTA ACTGGGATAT AATAAGACAA GTAAAGGAAG CAGTTAATAT TCCTGTTATA
GGAAATGGAG ATGTATTTAC TGCGGAGGAT GCTTTAAGTC TTAAAAATCA AACTAACTGT
GATGGAATTA TGGTTGCAAG AGGAAGTATG GGAAACCCAT GGATCTTCAA GCAAATAGTT
CAGAAATTAA ATGGAGAAGA GGTTTATATG CCTACTCCAG AAGAAAAAAT AGATATGTGT
ATAAGACACT ATAATTTATC ACTTAAATAT GATGGAGAGT ATAAGGCTGT AAGAGAAATG
AGAAAACATG CAGCTTGGTA TATAAAAGGA TTAAATAATT GTACTGAAGT TAAGAATAGG
CTTAATTTAG AAGCTGATCC AGAGAAGATT ATGGGTATCC TTAATGAGTA TAAAGAATAT
TTAATGAAAA ATGATTTATA A
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| Protein sequence | MKISNIVLEN NVFLAPMAGV TDISFRGLCK EMGAGIVCTE MVSAKALYYG SENTKELMRI
ADEEKPVSCQ MFGNDPEIMA YVTEKHFNTN DDICIIDVNM GCPAPKIVKN GEGSALMKNP
KLAYEIMSSI KKVATKPVTV KFRMGFDEEN INAVEFAKIM EEAGVDAIAV HGRTRAQMYE
GKANWDIIRQ VKEAVNIPVI GNGDVFTAED ALSLKNQTNC DGIMVARGSM GNPWIFKQIV
QKLNGEEVYM PTPEEKIDMC IRHYNLSLKY DGEYKAVREM RKHAAWYIKG LNNCTEVKNR
LNLEADPEKI MGILNEYKEY LMKNDL
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