Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2478 |
Symbol | cphB |
ID | 4201134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2749722 |
End bp | 2750558 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083343 |
Product | cyanophycinase |
Protein accession | YP_696892 |
Protein GI | 110798797 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4242] Cyanophycinase and related exopeptidases |
TIGRFAM ID | [TIGR02069] cyanophycinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATT TGAAAAGTAG TAGTAAAAAA AATTTAATAA TAATAGGTGG AGCAGAAGAT AAGAAAGGGG AAAAGATTAT ATTAAATTTT GTAGCAGATA AATTTAAAGA ATCTGAAGGA ATTATGTTGA TTGCAACCAT AGCTACAGAA TCACCTAATA TAGTCATAGA ACAGTATAAA AATATATTTT CAAGTATGGG AATAAGAGAA ATCAAAGAGC TTCGTGTCAT AGAAAGAGAA GAAGCTTTTG ATGAAAATAA TATTTCTTTA GTAAATGAGG CTTCAGTAAT ATTTTTTACT GGAGGAGATC AGCTTAGAAT AACTAGTTTA ATTGGGGGAA CTCCTCTTTA TGATACATTA CAAAAAAGAA GTAATGAGGG ATGTTACTTT GTAGGAACAT CAGCAGGGGC TTCTGTTATG AGTGATGTTA TGATAGTTGG TGGAGAAGAA GAGGAATCAC CTAAAAAGAG TACACTAAAT ATGTCTGCAG GATTAGGTTT AATTAAAAAT ACTCTTATAG ATCAACACTT TGCTCAAAGA GGAAGAATAG GTAGATTATT ATCAGGAGTG TGCCAAAATC CTGAAGTTTT AGGAATTGGT ATAGATGAAG ATACTGCTAT AGTAATTAAT GATGATGAAT TAACTGTAAT TGGTAGTGGA GCAGTTTATT TTGTAGATGG AAGAAATATT GAATATACAA ATGTATCTGA GAAAAAACAA GATGAGGTAT TTAGTATATT TAATATAAAG TTACATGTAT TAACAGCAGG CAAAAAAATG AATTTATCAA CTAGGGTGCC TTTTGAGGAG GAAAGAAATA AAAATGAAGA TAAATAA
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Protein sequence | MNNLKSSSKK NLIIIGGAED KKGEKIILNF VADKFKESEG IMLIATIATE SPNIVIEQYK NIFSSMGIRE IKELRVIERE EAFDENNISL VNEASVIFFT GGDQLRITSL IGGTPLYDTL QKRSNEGCYF VGTSAGASVM SDVMIVGGEE EESPKKSTLN MSAGLGLIKN TLIDQHFAQR GRIGRLLSGV CQNPEVLGIG IDEDTAIVIN DDELTVIGSG AVYFVDGRNI EYTNVSEKKQ DEVFSIFNIK LHVLTAGKKM NLSTRVPFEE ERNKNEDK
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