Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2477 |
Symbol | cphA |
ID | 4201752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2747111 |
End bp | 2749735 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083342 |
Product | cyanophycin synthetase |
Protein accession | YP_696891 |
Protein GI | 110801078 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA ATAATCAACG TATCTTTGAG GGAAGAAACA TATATTCACA TAGAAAATGT ATTAGATTAG ATGTTGATTT AGAGGGATAT TGTGAAACTC CTACTAAAGA TATTGATGGA TTCAATGAAA GGTTATTAAG TTATGTTCCA GAGTTATATA CTCATAGGTG TGGAATAGAC ATAGAAGGTG GATTTGTTCA GCGTTTAAAA GAGGGAACAT ACTTAGCTCA TGTTTGTGAA CATACAATTA TAGGAATACA TAATAAACTA GGTATAGATA TAAAATACGG AAAAGCAAGA GAAATAAAGG ATGATTTTTA TTACATAATA TTTGAATATA AATTAAAAAG AACAGCAATA TTAATAGCTG AATTAGCCAT AGATCTGATA AATTCAATAA TAAAGAAAAA AGATATTAAC TTTGATGAAA GAATAGAAAT AATAAAGAGA GTTATTATGG AAGAGAGCAT AGGGCCATCA ACAAAGGCTA TATGTGATGC GGCTAAAGAA GTTGGTCTTC CTATAATTAC AGTAGGAAAC GAAAATTTAT ACCAAATAGG TTATGGAAAA GCAGGAAAGA GGTTTAGTGC CACTATTGGC AATAATACAA AGGGAATTGC TATAGATATA GCCTGTGATA AAATGCTTAC AAAAGAACTT TTAGATATAC AGAACTTGCC TGTTGCCAGA GGAGAAAAGG TATTTAACAC AATACATCTT CTTGAAGTGG TTAATAGAAT TGGGTATCCT GTAGTATTAA AACCACAATG GGGAAGCAAG GGGAATGGAG TTTTTGTAAA TATAAATAGT GAAAAAGAAC TTTTAAGAGC CTATGCTGAA ATCACAAAAG AATGTAAAGA AATAATGATA GAAGAATATA AGGTTGGAAA TGACTATAGA GTAATGTTAG TGGATTATAA GGTAGTAGCA GTTTCTTTAA GAAAACCTCC ATATATAACA GGTGATGGAG TAAGAACTAT TAGAGATTTA ATAGAAGCTA TGAATGCTAA TCCACTAAGA GGAGAAGGAC ATGAAAAACC TTTAACAAAG GTTAAAATAG ATGAAGAATT AATAAATAGA TTAAGCAAGC TAGGATATTC TCTAAACTCA GTTTTAGAGT ATGGAGAAAA AGTTACCTTA AGAGGAAATG CAAATCTTTC TACAGGTGGA AGTGCTGAGG ACTATACTGA CTTAATATGT AAAGAAAATA TTGAAATTTG TGAAAGAGCA GCTAAAACTA TTGGATTAGA TATATGTGGT ATAGATATTT GTGCAAAATC GATAGCAGAA CCTCTATATG AAAATGATGG AATAATCTTA GAAGTTAACG CAGCCCCAGG AATAAGAATG CATCATTTTC CTACTATAGG CAAAGAAAGA AATGTAGGAA GAAAAATTTT AGATAATATG TTTAAAGAGA ATTATTCTAA TATTCCTGTT ATTTCAGTTA CGGGAACAAA TGGAAAAACT ACTACAGTAA GATTAATATC TTATGTTTTA AATTTAATTG GATTTAATGT AGGGTGTACA ACGACTTCCG GAGTTAAAAT AGGAAATAAG TATATACATA AAGGTGATGA CACAGGATAT AATAGTGCAA GGTCTGTATT ATTAAATCCA GAGGTTGATA TAGCAGTTTT AGAAAGTGCA AGAGGTGGCT TGGTAAGAAG AGGATTAGCT TATGATTTAG CAGATGTAGG AGTAATAACT AACATAAGAG AGGATCATTT AGGAATAGAT GGAATAAATG ATATGGAAGA TTTGTCTTTT GTAAAATCTT TAGTTGGTGA AGCTGTAAAA GATAATGGAT ATTCAGTTAT AAATGCTGAT GATGAATGGA GCTTAAAAGT TTTAGATAGA ATTAAAAAGC CTAAAATATT ATTTTCAATG AATGAAAATA ATAAATATCT ACAGGAAAAT TTAAAACATG GAAATCCTAT TGTGTTTTAT AGAGATGAAA CTATATATGT AAAAAATAGA AGTAAAGAAT ACAAAATAGC TTCTGCAGAG GAAATGAAGT TTACTATGAA TGGTAAACTA AAGCATAACA TAGAGAATGC TATGGCAGCT TGTGCAGCCT TAGTTGGGAT AGAAGTTGAT TATTGCATCA TATCTAAAGG GCTGAAACAG TTTAAATCTT GTGAAGAAGA CAACAGAGGA AGATTTAATA TGTTTGACGT TAATGGTATA AATGTAATAT TAGATTATGG TCATAATATT GATGGATACA AGGTGGTTAT AGACTCTCTT AAAAATCTTG GTTTAAAAAA TATAACTGGA ATAATAGGGG TTCCTGGAGA TAGAGATTTA AATACTATGA AAGAAGTCGG TAGAATAAGT GGAGACTTTT TTGATTCCAT AGTTATAAAA GAGGATAAAG ACTTAAGAGG AAAAGATAAA GGTGAGGTTG CTAGTATAAT AAACGAAGGT GTATTATCAT CAAATAGAAA AGATTTAAAT GTAAAAATCA TATTGTCAGA GGAAGAAGCA CTTAGAGAAA CTTTAAAGTT AGCTAAAAAA GGTGAAACTA TTATAATGTT TTTTGAAGAT TACGAATCTC TATATGATAT AATAAATGAA TTTAAAAATA AGGGCACAAA AGATTTAAAA AGTGCTAGCA TATAG
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Protein sequence | MKINNQRIFE GRNIYSHRKC IRLDVDLEGY CETPTKDIDG FNERLLSYVP ELYTHRCGID IEGGFVQRLK EGTYLAHVCE HTIIGIHNKL GIDIKYGKAR EIKDDFYYII FEYKLKRTAI LIAELAIDLI NSIIKKKDIN FDERIEIIKR VIMEESIGPS TKAICDAAKE VGLPIITVGN ENLYQIGYGK AGKRFSATIG NNTKGIAIDI ACDKMLTKEL LDIQNLPVAR GEKVFNTIHL LEVVNRIGYP VVLKPQWGSK GNGVFVNINS EKELLRAYAE ITKECKEIMI EEYKVGNDYR VMLVDYKVVA VSLRKPPYIT GDGVRTIRDL IEAMNANPLR GEGHEKPLTK VKIDEELINR LSKLGYSLNS VLEYGEKVTL RGNANLSTGG SAEDYTDLIC KENIEICERA AKTIGLDICG IDICAKSIAE PLYENDGIIL EVNAAPGIRM HHFPTIGKER NVGRKILDNM FKENYSNIPV ISVTGTNGKT TTVRLISYVL NLIGFNVGCT TTSGVKIGNK YIHKGDDTGY NSARSVLLNP EVDIAVLESA RGGLVRRGLA YDLADVGVIT NIREDHLGID GINDMEDLSF VKSLVGEAVK DNGYSVINAD DEWSLKVLDR IKKPKILFSM NENNKYLQEN LKHGNPIVFY RDETIYVKNR SKEYKIASAE EMKFTMNGKL KHNIENAMAA CAALVGIEVD YCIISKGLKQ FKSCEEDNRG RFNMFDVNGI NVILDYGHNI DGYKVVIDSL KNLGLKNITG IIGVPGDRDL NTMKEVGRIS GDFFDSIVIK EDKDLRGKDK GEVASIINEG VLSSNRKDLN VKIILSEEEA LRETLKLAKK GETIIMFFED YESLYDIINE FKNKGTKDLK SASI
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