| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2317 |
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| Symbol | |
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| ID | 4201105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2567952 |
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| End bp | 2569370 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083182 |
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| Product | glutamate:gamma aminobutyrate antiporter family protein |
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| Protein accession | YP_696740 |
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| Protein GI | 110798982 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00910] glutamate:gamma-aminobutyrate antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGTA AATCAAGTGC AAATGCAAAA ACACTTACTT TGTTTGGGTT CTTTGCTATG
ACAGCATCAA TGGTAATGAC AGTATATGAA TACCCTACAT TTGCAACATC AGGATTTCAT
TTAGTATTTT TCTTAATCGT AGGCGGACTT TTATGGTTCT TACCAGTTGC ATTATGTGCA
GCAGAAATGG CAACTGTAGA TGGATGGGAA GAAGGCGGTA TCTTTGCTTG GGTAGGTAAT
ACTTTAGGTG AAAGATGGGG ATTCGCAGCG ATCTTCTTCC AATGGTTCCA AATAACAGTT
GGATTTGTTA CAATGATTTA TTTTATATTA GGGGCTCTAT CTTATGTGCT AAATTGGCCA
GCATTAAATA GTAATCCATT AATAAAATTT ATAGGTGTTT TAATCATATT CTGGGGATTA
ACTTTCTCAC AATTTGGAGG AACTAAAAAT ACAGCTAAAA TAGCTAAAGC AGGATTTGTT
TTCGGAGTTG TAGTTCCAGC AATTATATTA TTTATATTAG GTATAATGTA CATAGCAAAA
GGTAATCCAG TACACGTTGA TTTAAGTGCA CATGCTCTTA TACCTGACTT TACAAAGGTA
AATACATTAG TTGTATTCGT ATCATTTATA TTAGCATACA TGGGAGTTGA AGCATCAGCA
TCACATGTTA ATAAATTAGA AAATGCAAGC AAAAACTATC CATTAGCTAT GTTTATACTT
GTTGTATTAG CAATAGTTCT TAATACAGTA GGTGGTTTAA CAGTAGCAGC AGTTATTCCT
GCTGAGCAAT TAAACTTAAG TGCTGGTGTT GTTCAAACAT TCCATCAATT AGTAGTTGTA
AACTTAGGTG AAAGTTTTGA TTGGATAACA AGAATAGTAG CTTTACTATT AGCTTTAGGA
GTTATGGCAG AAGTAAGTTC ATGGGTTGTA GGTCCTTCAG AAGGTATGTA TGCAGCAGCT
AAAAAAGGAT TATTACCTAA AAAATTAACT GAAGTTAATA ATCATGAAGT TCCAGTTCCA
TTAGTATTAG TTCAAGGTTT AGTAGTTACT ATATGGGCAG CTGTTTTAAC ATTTGGCGGT
GGTGGAAATA ACGTTTCATT CCTTACTGCA ATATCATTAA CAGTTGTTAT ATACTTAGTT
GGATATTTAT TATTCTTCAT AGGATATATT ATTTTAATAT TAAAACATGG AGATTTAAAA
CGTGCTTATC ATGTACCAGG TGGAAAAACA TTTAAGATGA TAGTAGCAAT AGCAGGATTC
GCTGTATCAG TATTTGCTTT AGTTATTTCA TTCGTACCAC CATCACAATT AACAGGAAAA
AGTGTATCAG AATATTTAAC TATACTATCA ATAAGTTTCA TAGTAACAGT TTTAATTCCA
TTTATAATTT ATGCTTTACA TGATAAATGG AATAAATAG
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| Protein sequence | MPSKSSANAK TLTLFGFFAM TASMVMTVYE YPTFATSGFH LVFFLIVGGL LWFLPVALCA
AEMATVDGWE EGGIFAWVGN TLGERWGFAA IFFQWFQITV GFVTMIYFIL GALSYVLNWP
ALNSNPLIKF IGVLIIFWGL TFSQFGGTKN TAKIAKAGFV FGVVVPAIIL FILGIMYIAK
GNPVHVDLSA HALIPDFTKV NTLVVFVSFI LAYMGVEASA SHVNKLENAS KNYPLAMFIL
VVLAIVLNTV GGLTVAAVIP AEQLNLSAGV VQTFHQLVVV NLGESFDWIT RIVALLLALG
VMAEVSSWVV GPSEGMYAAA KKGLLPKKLT EVNNHEVPVP LVLVQGLVVT IWAAVLTFGG
GGNNVSFLTA ISLTVVIYLV GYLLFFIGYI ILILKHGDLK RAYHVPGGKT FKMIVAIAGF
AVSVFALVIS FVPPSQLTGK SVSEYLTILS ISFIVTVLIP FIIYALHDKW NK
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