Gene CPF_2271 details

Gene Information

• Locus tag: CPF_2271
• Symbol: recO
• ID: 4202376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2521585
• End bp: 2522262
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638083136
• Product: DNA repair protein RecO
• Protein accession: YP_696694
• Protein GI: 110800456
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1381] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00613] DNA repair protein RecO

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTTGGA TTTTTACCGA GAAAATGGGT AAGATAACAG CTATAGCTAA GGGTGCAAAG 
AAAAGTAAAA GTAAACTCTT TTCATTAACG CACCCTTTAT GCTATGGCGA TTATTTATTA 
TTCAAGGGAA AGGGTTTATA TAGGTTATCT GAAGGAAAAA TAAGAACTTC CTTTCAGACA 
TCTTTAACTG ACCTAGAAAA GCTTACTTAT GCATCTTACT TATGTGAGCT TATTGATATA 
TCACTACAGG ATGAAGAAGA AAATTTTAAT TTATATAAAG AGTTTATAAC CTGTCTTTAT 
TTAATAAATA CTGAGGCTAT AAGTTATGAA CTATTAATAA GAGCTTTTGA GCTTAAATTA 
TTAAAATACA CTGGGTATGG ATTAAGATTT GATAATTGTG TATTTTGTAA AAATAAATTA 
AGTGTTTCAA ACTACATTAG TTTAAGATAT TTTGGAGGCG TTTGTGATAA ATGTCCCAAG 
GAACATGGGC TTTACATAAA TAAAGCCACA TATAATGCCT TAAGATTCTT AAATAATACT 
TCTTTGGATA AAGTATATAG ATTAACATTA ACAGAAGAGG TTAAAGCAGA ACTTTTTAAG 
GTTACTAGTT TTATAATATC TTCTGTATAT TCAAGAAAAC CTAAAAGTTT AGAAATGTTA 
AAGTTTATAA AGGAGTGA 

 

Protein sequence

MLWIFTEKMG KITAIAKGAK KSKSKLFSLT HPLCYGDYLL FKGKGLYRLS EGKIRTSFQT 
SLTDLEKLTY ASYLCELIDI SLQDEEENFN LYKEFITCLY LINTEAISYE LLIRAFELKL 
LKYTGYGLRF DNCVFCKNKL SVSNYISLRY FGGVCDKCPK EHGLYINKAT YNALRFLNNT 
SLDKVYRLTL TEEVKAELFK VTSFIISSVY SRKPKSLEML KFIKE