Gene CPF_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2185 
Symbol 
ID4203053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2425462 
End bp2426232 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content33% 
IMG OID638083050 
Producthypothetical protein 
Protein accessionYP_696609 
Protein GI110799123 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTG ACAAAGTATT ACATATTGCA ACTTTTGCAG GTAGAATAAT ACTAGAAAGC 
GGTGGAGAAA CTTACAGAGT TGAGGAAACT ATTTGTAGAA TCTGTGCAGC TTACGGTATT
AGATATGCTG AAAGTTTTGT TACCCCAACT GGAATTATGG TTTCTGTTTA CGATGAGAAT
AATTATACAA CTACTTTAGT AAAAAGAGTT ACTAATAGAA CTGTTGATTT GCAGAAAATC
CACTTGGTTA ATGAACTTTC AAGAAAACTT TATACGGAAA AATATTCTCT TGATGAGGTT
TTAGAAAAAT TAATAGATAT AAATGAAAAC TGTCCTAAAT ACGATTTCAG AACAAATCTA
GTATTTTCAG CCATAGCAGC TGCTGGATTC ACCACTATAT TAGGAGGTAA TATAGAAGAC
TGCGTAGTAT CATTTTTTGT TGGAATGTTT GTAAAACTAG CTACCTTTAA GGCTGGGGAA
TTAGGAATAA ACGCCTTTTT TATAAATACT TTAGGTGGAG CAATCGCTGC TCTCTTATCC
TTAATAGCCT ATAGCTTAGG AGTTGGAAGT AATTTAGACA CAATGATAAT AGGTAGTATA
ATGCTATTAG TTCCTGGTTT ATCTATTACA AATGCTATTA GAGATACAAT AGCTGGTGAT
TTAATATCAG GCCTTATAAG GGCAGCTGAG GCCTTCTTAG TAGCTATCTC TATAGCTGTT
GGAACTGGTA TGGTTATGAG TATTTGGATT TACTTTGGAG GTGGTATATA A
 
Protein sequence
MDFDKVLHIA TFAGRIILES GGETYRVEET ICRICAAYGI RYAESFVTPT GIMVSVYDEN 
NYTTTLVKRV TNRTVDLQKI HLVNELSRKL YTEKYSLDEV LEKLIDINEN CPKYDFRTNL
VFSAIAAAGF TTILGGNIED CVVSFFVGMF VKLATFKAGE LGINAFFINT LGGAIAALLS
LIAYSLGVGS NLDTMIIGSI MLLVPGLSIT NAIRDTIAGD LISGLIRAAE AFLVAISIAV
GTGMVMSIWI YFGGGI