| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2163 |
|---|
| Symbol | |
|---|
| ID | 4203143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2400229 |
|---|
| End bp | 2401371 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083028 |
|---|
| Product | aminotransferase, classes I and II |
|---|
| Protein accession | YP_696587 |
|---|
| Protein GI | 110799307 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ATGTTATTGG GGTAGAAATA TCAGGAATAA GAAAATTCTA TAATGAAGTA
GTAAAATTCC CAGAGGCTAT ATCATTAACT CTAGGACAGC CAGATTTTCC TGTTCCAGAA
AAGGTTAAAG AAGCTATGAT AAGGGCTATT GAAGAAGGAA AGACAACATA TACAGCTAAT
GCTGGTATAG TTGAATTAAG AGAAGAAATA TCAAGCTTAT TAAAAAATAA TTTTGACATT
GATTTTAGTA AGGATGAAAT AATTATAACT GTAGGTGGAA GTGAAGGTTT ATATGCAGCT
ATGACAGCCC TTTTAAATTC TGGAGAGAAG GTTTTAGTTC CATCAATTGC ATATCCAGCT
TATGAAAGCA TAAGCAAAAT AATAGGATGT GAAGTTATAA ATTACGATTT AAATGAAGAT
TTTTCAGTTA ACATAGAAAG TTTAAAAGAA GGAATAAAAC AAGGGGGAAA ACTTTTAGTT
CTTTCTTATC CATGTAATCC TACAGGGGCA TTACTTAGTA AAAAAAGTAG AGATGAGTTA
ATAGAGATTA TAAAAGAAAA TGATATATTG GTATTAACTG ATGAAATTTA TTCATCTCTT
TGTTTTGAAG AGGAGTATTA TTCTGTAGCT CAATGCAAAG ATATAAAAGA AAAAATAATA
TATGTAAGTG GATTCTCTAA GATGTTTTCA ATGACAGGTC TTAGAATTGG ATATGTAGCA
TGTTCTAAGG AAATATATGA TCAAATTATA AAGGTTCATC AATATAATTC TTCATGTGCA
ACATCTATTT CTCAATGGGG AGCCTTAGAA GGATTAAAAT CTTGTATGAA TGATGTTGAA
AATATGAAGG AATCTTTTAA AGAAAGAATG AATTTTACTT ATAAAAGATT AAAAAGTATG
GGCTTAGAAG TGGAAAAACC TAAAGGAGCT TTTTATATTT ATCCTAATAT AAGTAAGTTT
GGATTAACAT CAGAAGAATT TTGTCATAGA TTACTTGAAG AAGGCAAAGT TGCCTGTGTA
CCAGGAGATG CCTTTGGAAA AGGTGGAGAA GGATATATTA GAATATCTTA CTGTTATAGC
AAAGATGAAC TTGAAAGAGC TTTAGATAAA TTAGAGGCTT TTGTAAAAAC TTTAAAAAAG
TAA
|
|---|
| Protein sequence | MNKNVIGVEI SGIRKFYNEV VKFPEAISLT LGQPDFPVPE KVKEAMIRAI EEGKTTYTAN
AGIVELREEI SSLLKNNFDI DFSKDEIIIT VGGSEGLYAA MTALLNSGEK VLVPSIAYPA
YESISKIIGC EVINYDLNED FSVNIESLKE GIKQGGKLLV LSYPCNPTGA LLSKKSRDEL
IEIIKENDIL VLTDEIYSSL CFEEEYYSVA QCKDIKEKII YVSGFSKMFS MTGLRIGYVA
CSKEIYDQII KVHQYNSSCA TSISQWGALE GLKSCMNDVE NMKESFKERM NFTYKRLKSM
GLEVEKPKGA FYIYPNISKF GLTSEEFCHR LLEEGKVACV PGDAFGKGGE GYIRISYCYS
KDELERALDK LEAFVKTLKK
|
|---|
| |