| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2143 |
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| Symbol | |
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| ID | 4201844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2386497 |
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| End bp | 2387837 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083008 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_696571 |
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| Protein GI | 110800257 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00831138 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATTA AACTGACAAA AAAGATAAAA TTTAGTGCCG TTCAGATTTT AGCTTTAGGT
TTTTCTATGG TTATTTTATT AGGTGCTATA ATATTAAGTC TTCCAATATC ATCTAAAAGT
GGTGAGTTTA CTCCTTTTTT AGATAGTTTA TTTACTTCAA CTTCAGCTGT ATGTGTTACG
GGACTTATAA CATTAAATAC AGCGGCACAT TGGAACTATT TTGGGAAAAC TGTCATAATA
ATCTTAATAC AAATAGGTGG ATTGGGATTC ATGTCCTTTA CAACTTTATT TGCCTTAATG
GTTAAGAAAA AAATAACCTT AAGGGAAAGA CTTCTTATAC AAGAAGCTAT GAATACCTTT
GGAATACAGG GGTTAGTTAG AATGATTAGA TATATCTTAG CATTTACATT TTCAGTAGAA
ATGTTAGGTG CACTATTATT ATCTACTCAA TTTATACCCA AGTTTGGATT CTTAAAAGGA
ATATACTATA GTATTTGGCA TTCTATATCA GCTTTTTGTA ATGCAGGGTT TGATTTATTT
GGAGATAATC TAGTTGGATA TGCTAACAAT AAAACTGTAA TATTAACAAT TGCAGCCTTA
ATAGTAATTG GTGGTTTAGG ATTTACTGTT TGGTCAGAAT TATATAATTA TAAGGGATAT
AAGAAATTAT CTTTACACTC TAAAGTTGTA ATAATGATAA CAGCTATCCT TTTAATTGGG
GGAGCTATTC TTATGTTCAT ATTTGAATAT AATAATCCTA ATACTCTAAA GTATATGAGT
TTTGGAGATA AATTAACTAA TGCATTCTTT GCTTCAGCAA CCACAAGGAC TGCTGGATTT
AACTCTGTTT CTACTGCGGA TATGACTTTA GCTGGAAAAT TCTTAACTAT ATTATTAATG
TTTGTAGGTG GATCACCAGG GTCAACAGCA GGGGGAATTA AAACTGCTAC CTTTGGTATA
GTAGTACTTA CTCTAATCTC TATAATAAGA GGAAGAGAAG ATACTGAAGT ATTTAAAAAG
AGAATTTCAA AAGAATTAGT GTATAAGGCT TTTGCTGTTT TATTTATAGG TTTTGGTATA
GTGGTACTTG GAACATTAAT TTTAGCAGTA ACAGAACCAG GATTTTCATT AGAATATATT
CTATATGAAG TTACATCAGC TTTTGCTACA GTTGGATTAA CTCTTGGATT AACTCCATAT
CTTTCAGTAA TAGGAAAAAT AATAATAATA ATAACTATGT ATTTAGGAAG AGTGGGCCCT
ATGACTGTTG TTCTAGCTTT AGCTAATAGA AAGAAACCAA GTGCATACAA ATACCCAGAA
GATAAAATAT TAATAGGATA A
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| Protein sequence | MYIKLTKKIK FSAVQILALG FSMVILLGAI ILSLPISSKS GEFTPFLDSL FTSTSAVCVT
GLITLNTAAH WNYFGKTVII ILIQIGGLGF MSFTTLFALM VKKKITLRER LLIQEAMNTF
GIQGLVRMIR YILAFTFSVE MLGALLLSTQ FIPKFGFLKG IYYSIWHSIS AFCNAGFDLF
GDNLVGYANN KTVILTIAAL IVIGGLGFTV WSELYNYKGY KKLSLHSKVV IMITAILLIG
GAILMFIFEY NNPNTLKYMS FGDKLTNAFF ASATTRTAGF NSVSTADMTL AGKFLTILLM
FVGGSPGSTA GGIKTATFGI VVLTLISIIR GREDTEVFKK RISKELVYKA FAVLFIGFGI
VVLGTLILAV TEPGFSLEYI LYEVTSAFAT VGLTLGLTPY LSVIGKIIII ITMYLGRVGP
MTVVLALANR KKPSAYKYPE DKILIG
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