Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1542 |
Symbol | recQ |
ID | 4203020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1759672 |
End bp | 1761450 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082420 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_695985 |
Protein GI | 110801424 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.260757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAG AGTTTGAGGT ATTAAATAAT ATTTTTGGAT ATAGGGACTT TAGAAAAGGG CAACAGGAGG TAATAGATAA GATTTTAAAT GGAAAGGATG TATTTTGTAT ATTACCTACT GGAGGAGGAA AATCTTTATG TTATGAAATA CCTGCTTATA TTTTTAAAGG AACAACACTT GTTATTTCTC CCTTAATATC TCTTATGAAG GATCAAGTTG ATAACTTAAA TTCCTTAGGA ATTAATGCTG CTTATATAAG TGGAGGAAAT GACTTTGAAG AGGTTAAAAA TATAATTAGG AAATTCATAA AAGGAGAATT TAAGCTTCTT TATGTATCAC CTGAGAGATT AGAAAATAGA TATTTTTTAG ATAATATAGA AAAAGCTAAT ATTGCACAAA TTGTAGTTGA TGAAGCTCAC TGCGTATCAA TGTGGGGCCA TGACTTTAGA AAAAGTTATA GCAAGATAAA ACCATTTATT TGTAATTTAA AGAAAAGACC AATTATTACA GCCTTTACAG CTACGGCTAC AGAGATAGTT ATGAAGGATT CCATTGAACT TTTAGGTCTT TATAATCCCT TTATTTATAA GGGTAGCTTT AGTAGAGATA ATTTGGAGAT AAATGTATTA AAAGAAGTTG ATAAATTAGA AATTATAAGT GAAATTATAA GTGAACATGA GGAAGAGTCA GGAATAATTT ATTGCTCAAC TAAAAATGAA GTTGAAGAAC TTTATAAACA TATGCTTTAT AGAGGGAAAA GTGTAGGGAA ATATCATGGA TCCTTAAAAG ATAAGGAAAA AAATTATTAC CAAGAAGAGT TTTTAAATGA TAATTTTAAG GTTATGATTG CCACAAATGC TTTTGGTATG GGAATTGATA AGCCTGATGT TAAGTTTATA ATACATTCAA CATTTCCAAA AAGTATAGAA AATTATTATC AAGAAATAGG CCGTGGAGGA AGAGATGGAA GCTTAGCTAA GTGTTATCTC CTTTATTCAG AGCAAGATAT AAGGGTTATG GATTATTTGA TAAGTTCAAC TACAGAAATA TCTAGAAGAA CTATAGAACT TAAAAAACTA GAAAAAATAA TAGAGTTTTG TAATTATGAT AAGTGTCTTA GAAAATATAT TTTAGATTAT TTTGGAGAGG AAAATTCCAT AAAGTATTGC AATAATTGTA CTAACTGCTT AAAAAATAGT GATTTAATAG ATATGACATT AGAGGCACAA AAAATATTAT CATGTATATA TAGAACAAAG GAAGCCTTTG GAGAAAGTGT TTTAATAGAT ATTTTAAGGG GGATTCATGG GCCAAAGATT GAAAAATATA AGCTATATGA GCTTTCAACC TTTGGAATAA TGAAAGAATA TACAAGTAAG TATATAAAGG ACATAATAAA GGAGCTTTTA TCTATTAAGG CTTTAGAGAG AAAAGAAGGA ACATATTCTA TGCTAAAGTT AAATAGAAAA TCTATAGGAA TATTAAAGGG AGAAGAAAAG GTACTTTTAG AGGTTAATAA TAATGAAGAA AGCATGTGCA TGGATTTAGA ACTTTTCAAG AAGCTTCGTA TTTTAAGAAA AGATATATCA AGAAGAGAAG GAGTAAAACC ATACATAGTT TTTACAGATT CAATGATTAT GGAGATAATA AATAAAAATC CTAAAAGTAA AGAGGATTTA AAAAATATTA GGGGTTTTGG AGAGCAGAAA ATAACAAAGT ATGGCCCTTT TATTCTTACA ACTTTAAGAG ATTATGAAAA GTATGGAAAA AGAAATTAG
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Protein sequence | MRREFEVLNN IFGYRDFRKG QQEVIDKILN GKDVFCILPT GGGKSLCYEI PAYIFKGTTL VISPLISLMK DQVDNLNSLG INAAYISGGN DFEEVKNIIR KFIKGEFKLL YVSPERLENR YFLDNIEKAN IAQIVVDEAH CVSMWGHDFR KSYSKIKPFI CNLKKRPIIT AFTATATEIV MKDSIELLGL YNPFIYKGSF SRDNLEINVL KEVDKLEIIS EIISEHEEES GIIYCSTKNE VEELYKHMLY RGKSVGKYHG SLKDKEKNYY QEEFLNDNFK VMIATNAFGM GIDKPDVKFI IHSTFPKSIE NYYQEIGRGG RDGSLAKCYL LYSEQDIRVM DYLISSTTEI SRRTIELKKL EKIIEFCNYD KCLRKYILDY FGEENSIKYC NNCTNCLKNS DLIDMTLEAQ KILSCIYRTK EAFGESVLID ILRGIHGPKI EKYKLYELST FGIMKEYTSK YIKDIIKELL SIKALERKEG TYSMLKLNRK SIGILKGEEK VLLEVNNNEE SMCMDLELFK KLRILRKDIS RREGVKPYIV FTDSMIMEII NKNPKSKEDL KNIRGFGEQK ITKYGPFILT TLRDYEKYGK RN
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