Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1519 |
Symbol | |
ID | 4202161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1735169 |
End bp | 1736002 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082397 |
Product | HAD family hydrolase |
Protein accession | YP_695962 |
Protein GI | 110800319 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTATA AAATGATATG TATAGATATG GATGGTACAT TATTAAATTC AAAGAAAGTT GTAAGTGAAG AAAATAGAAT TGCATTAAAA AAAGCTTATG AAAAAGGAGT ACACATAATA ATATGCACAG GAAGAAATCC TAAAAATGCA ATATATTTTT CAGAATTTTT AGGAGTAAAC TGTGCTGTAA TAGCTAATAA TGGAGCTTGG GTAATTGATG AAGATAAGGA AGTTATAATA TCAAAGGATG TTTTAGATGA AAATCAATGT ATGGATATTA TGAGCATATG TAAAGAGTAT AAAGGGGTTC CTAGTTTTCA TTCAAGGGAT AGTGTGTATT GGCCATCAAG ATTTAGAAAA TATTTATGTG ATATTATTTT GAATAAAAAA ATACCTGAAA AATATAGAGT TAAGAATATT TATGTGAAAG AAAAAGAAGA GTGGAGAAAG GTCTTTAAAA GCAATAACAT AGGTAAGTGT ATAATAATAG AATTAAATAC TAAAAAGCTA AAGAAAATAA GAGAAAATTT AATTAAAAAA GGTAATTATG AAATTACTCA ATCAGGAAGA TATGCCTTAG AAGTAAATAA TAAAGGGGTA TCAAAGGGAA GGGCTGTAAA GGCTTTAGCA GAGGAATATA AGATAAAAAG AGAAGAGATT ATATGTATAG GTGATAATGA AAATGACTTA TCTATGATTA CTTATGCAGG CTTAGGTGTT GCTATGGGAA ATGCCATAGA TTCTTTAAAG GAAAAAGCAG ATTATATAAC TGAAAGTAAT GATAAAAATG GGGTAGCAAA GGTAATATAT GAATTTGTAT TAAAGAATGA TTAA
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Protein sequence | MKYKMICIDM DGTLLNSKKV VSEENRIALK KAYEKGVHII ICTGRNPKNA IYFSEFLGVN CAVIANNGAW VIDEDKEVII SKDVLDENQC MDIMSICKEY KGVPSFHSRD SVYWPSRFRK YLCDIILNKK IPEKYRVKNI YVKEKEEWRK VFKSNNIGKC IIIELNTKKL KKIRENLIKK GNYEITQSGR YALEVNNKGV SKGRAVKALA EEYKIKREEI ICIGDNENDL SMITYAGLGV AMGNAIDSLK EKADYITESN DKNGVAKVIY EFVLKND
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