Gene CPF_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1182 
Symbol 
ID4201305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1348121 
End bp1348795 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content23% 
IMG OID638082063 
Producthypothetical protein 
Protein accessionYP_695628 
Protein GI110799049 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000961119 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATC TAATTTATTC ATTAATAGCA GTAATAATTT TAACAGTAGG TCTAAACAAC 
ATTTTTAAAA AGCAATCTAA ATATTTTTAT ATGTTGGCTA CTTTAATATC AGTAGTAGTT 
ACATCATATG AGATTTTTAA AATATGGACA GGCTTTAAAT TAGAAGGAAT TATATTTGTT 
TTAGAAAGAA GCTTTATGAA AGGCTTTGTA TCAACAGCAT TATTTATTTT AGTAATGTTT 
GCAGGAGCTT TAAGTAAGAA ATGGGGAATT ACTAAAAAAC TTTTAAGAGT TAGAGCAGAA 
ATGGCAATTT TAGCATCTAT ACTTATATTA CCTCATTTTA TAATCTATAC TTATAAGTTC 
TTAGTAAGAT TATTTAGTGG AAAGCCATTA AGCATTTTAT ACATATCTTT TATAATAGTA 
GGATTAATAG CATTTATAAT AATGATACCT CTATTTATAA CATCATTTAA GAAAGTAAGA 
GTTACTATGT CACCAAGTAA ATGGAAAATG GTTCAAAGAT GGGCATATCC TTTTTATTTT 
CTAGTGTATG TACATATAAT ATTAATCTTA TTTAATAAGA AAGTTTTTAA TTTAAATGCT 
GTAATAATAT ATACAGTTAT ATTCTTAGGA TATTTTATTT TAAGAATATG TAATAATAAA 
AAAGCTATTA AATAA
 
Protein sequence
MEYLIYSLIA VIILTVGLNN IFKKQSKYFY MLATLISVVV TSYEIFKIWT GFKLEGIIFV 
LERSFMKGFV STALFILVMF AGALSKKWGI TKKLLRVRAE MAILASILIL PHFIIYTYKF 
LVRLFSGKPL SILYISFIIV GLIAFIIMIP LFITSFKKVR VTMSPSKWKM VQRWAYPFYF 
LVYVHIILIL FNKKVFNLNA VIIYTVIFLG YFILRICNNK KAIK