Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0353 |
Symbol | |
ID | 4201748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 422075 |
End bp | 422872 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081237 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_694810 |
Protein GI | 110801074 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.45647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGT TAGGTAAGAT TGCTGTAATT ACTGGAGCAA CTAGTGGAAT AGGGAAGGAA TATGCTTTTC AACTAGCTAA AAAAGGATAT GATTTAATAT TAGTAGGTAG AAGAGTTGAA AAAATTAAAA CTGTTGCAGA AGAGATAGAG AATAATTTTA AGGTTAAGAC ACATGTAGAA ATTTTAGATT TAACTGATGA TAATAAACTT GATGATTTTA TAAAAAGATT AGAGAAAAAA GATAACATAG AATTTTTAGT GAATAATGCA GGATATGGAG CTGATGATTC CTTTACAAGG GATGAGTATA GTAAGCAGTA TGATATGGCA AAGGTTCATA TGTTAGTTAC TATGAAACTT TGTCATAGCT TAAGCAAGAA GATGAAAGAA AATAATAAGG GATACATAAT AAATGTTAGC TCTATGGCTG GATTTAACGT ATTTCCAAGT TCAGCAATGT ATTGTTCAAC AAAGGCTTTC TTAATAAGTT TTACTCAATG TTTAGCCATG GAACTTTTAG AGAATAATAT AAAGGTTCAA TGCCTTTGTC CTGGATTTAC TAGAACAGAT TTTCATAGTA AGTTAAACAT GGAAGAGAGT AAATTGCAAA ATAAAGGTTT TGTAAGATGG ATGAGTACAA AAGAAGTGGT GGAAATAAGT TTGAAAAATA TAAATAAGAA ATTAAAGGTA ATAGTTATTC CTGGATTTTG TAATAAATTT TTATATTTTG TTAGCAAGTT TACACCTAGA TGGCTCTATT ATAAGGTAGC TATAAAGGGA TGGGAGTTAA TGGACTAA
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Protein sequence | MNELGKIAVI TGATSGIGKE YAFQLAKKGY DLILVGRRVE KIKTVAEEIE NNFKVKTHVE ILDLTDDNKL DDFIKRLEKK DNIEFLVNNA GYGADDSFTR DEYSKQYDMA KVHMLVTMKL CHSLSKKMKE NNKGYIINVS SMAGFNVFPS SAMYCSTKAF LISFTQCLAM ELLENNIKVQ CLCPGFTRTD FHSKLNMEES KLQNKGFVRW MSTKEVVEIS LKNINKKLKV IVIPGFCNKF LYFVSKFTPR WLYYKVAIKG WELMD
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