Gene CPF_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0080 
Symbol 
ID4200962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp95495 
End bp96649 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content33% 
IMG OID638080961 
Productalcohol dehydrogenase, iron-containing 
Protein accessionYP_694544 
Protein GI110799131 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATC AATTTATTAT GCCAAAACGT ATTATTTCAG GTGAAAATGC TTTAAATGAA 
AGTAAAGCGT ATTTAAAGAG TTTTGGTAAG AGGGTTTTAA TAGTTACTGA TAAAGTAATG
ACTGATCTAG GTAATGTAAA GGTTTTGACA GAGGTATTAG ATAGTGAGAA TATTGAGCAC
GTTTTATACA ATGAAATAAA TAGTGAACCT ACAGATACTA TGATAGAAAA AGGAATTAAG
CTTTATAAAG AAAATCAATG TGATTTTCTA ATTGGTTTAG GTGGAGGGAG TCCAATAGAT
TCCACTAAAG CCATTGGAGC TATGATAACA AACGAAGGTA AGATATCTGA TTATATGGGG
AGAGAAATAG AAAAAGAACT TCCACCATTT GCTGTAATAC CAACTACAGC TGGAACAGGT
TCAGAAGCTA CTCAATTTAC AATAATTACA GATACTAAAA ATGATGTTAA GATGCTTTTA
AAAGGAGCTA ACTTATTACC AAACTTAGCA ATAGTAGATC CAAGATTTAC AATGACAGCA
CCTGCTAAGA TAACAGCAGC TACAGGATTA GATGCTTTAA CCCATGCTAT AGAGGCTTAT
ACATCTAGAA AGGCACAGCC ACTTTCAGAT AGTTTTGCAG TTTCAGCTGT AAAAAGAATA
TTTAAGTACT TACCTATAGC TTTTGATACT CCAAAGGATT TAAAAGCAAG AGAAGAGATG
TCAATTGCAG CTTTAGAAGC TGGAATAGCA TTTAATAACT CTTCAGTTAC AATAGTTCAT
GGAATGAGTA GACCAATAGG AGCTTTATTC CATGTACCAC ACGGATTATC AAATGCAATG
CTTTTAGAAG CTTGTTTCAC ATATGTAGTA GATGGTGCTT ATGATAGATT TGCTCAGCTA
GCTAAAGAAA TAAATATAGC TAATGATAAT ATGAGTAATG AAGAGGCCGC AAAAGCATTT
ATAGATGAAG TGGTTAAATT AATGGTTAAA TTAGAAATAC CAACTTTAGA AGAGTTTGGA
GTAGATAAAA CTAAGTTCTT TGATAATATA GAAAAAATGG CAGCTGACGC TATGGAAAGC
GGAAGTCCAA GTAATACAAG AAAGATTATT GAAGTTGATG ATGTGATAAA AATCTACAAT
AATCTTTGGA GGTAA
 
Protein sequence
MANQFIMPKR IISGENALNE SKAYLKSFGK RVLIVTDKVM TDLGNVKVLT EVLDSENIEH 
VLYNEINSEP TDTMIEKGIK LYKENQCDFL IGLGGGSPID STKAIGAMIT NEGKISDYMG
REIEKELPPF AVIPTTAGTG SEATQFTIIT DTKNDVKMLL KGANLLPNLA IVDPRFTMTA
PAKITAATGL DALTHAIEAY TSRKAQPLSD SFAVSAVKRI FKYLPIAFDT PKDLKAREEM
SIAALEAGIA FNNSSVTIVH GMSRPIGALF HVPHGLSNAM LLEACFTYVV DGAYDRFAQL
AKEINIANDN MSNEEAAKAF IDEVVKLMVK LEIPTLEEFG VDKTKFFDNI EKMAADAMES
GSPSNTRKII EVDDVIKIYN NLWR