Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0079 |
Symbol | |
ID | 4202189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 94243 |
End bp | 95013 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638080960 |
Product | putative transcriptional regulator IolR |
Protein accession | YP_694543 |
Protein GI | 110799326 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCAA AAAGAATAGA CCTAGTAGAA AATTACATTA TTAATCACAA AACCGTATCA ATTGACAAAC TATGTGAAGT GTTTGATGTA TCAAAAAATA CCATAAGAAG GGATTTAAGT GTTCTAGTTG AAAAAGGAAC CATAAAAAAA GTCTATGGTG GAGTGACGGT TAATGAAAAT CAAGAGTTAG TATCTTTTGA AGAAAGAAAT GTTAAAAATA GCAATTCAAA ATTAGCTTTA GGAAAGGCTG CTGCTGAATT TATTGAAGAT GGATATAGCA TCTTTTTAGA TTCTGGTACA ACAACAGTTA ATATTATCGA TTTCCTAAAA GATAAAAAAG ATATAACTAT TTTCACTAAT AGCGTTACAG CTATATGCAA AGGAATTCAC TACAATAACT TAAATATAAT TTGTTTATCA GGAATTCTTA ACAGAAAAAC TCAATCTTTT ACAGGCTTAC ATAGCACAGA TATATTAAAA AGTTATAATA TAAATAAATG CTTCATGGCT TGTACTGGTA TTTCACTAAA AAGAGGAGTT ACTAATTCTA CTAAAGAAGA ATTTAAAATA AAGAAAACTG CAATCTCTAG AAGTGCTGAA TGTTTCCTTT TAGCTGATCA ATCAAAATTT GATCATGTTT CTTTAATGAC TTTCTGTGAA ATTAATGATT TAAATTGTGT TATAACAGAT GCAAAACCTA GTGATGAATA TATTGAATAC TTTAATGATA ATAATGTAGA TTTAAAAATT TGTGAAAAAG TAATTTACTA A
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Protein sequence | MRSKRIDLVE NYIINHKTVS IDKLCEVFDV SKNTIRRDLS VLVEKGTIKK VYGGVTVNEN QELVSFEERN VKNSNSKLAL GKAAAEFIED GYSIFLDSGT TTVNIIDFLK DKKDITIFTN SVTAICKGIH YNNLNIICLS GILNRKTQSF TGLHSTDILK SYNINKCFMA CTGISLKRGV TNSTKEEFKI KKTAISRSAE CFLLADQSKF DHVSLMTFCE INDLNCVITD AKPSDEYIEY FNDNNVDLKI CEKVIY
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