Gene CHU_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3564 
Symbol 
ID4184401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4113519 
End bp4115237 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content37% 
IMG OID638073551 
Producthypothetical protein 
Protein accessionYP_680140 
Protein GI110639930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA GGCAAAAAAT TCATCTAACA TTACTTTTTT TGTTCATTTC CATGCAAGCG 
AGTCTTGCTC AAGTATTGGA TAAAAAAGTA ACAATGCAAT TTCAGAATAT TAGTCTGGAA
CAGGCATTAA AAAAAATAAA ATCAAGTTAC GGTGTTAATT TTTCTTATTC TCCAGATCAG
GTTGATTTAA GCAAGCATGT TTCATTTCAG GTAAGAAACG AAAGTTTGGG ACAGGTTCTA
AACCAATTAT TCAGATCGAC TCCAATTACA TACAGAGCTG TTGGAAATCA AATTGTTTTA
AAGAGCGGAA AAAGTGTGCC TAAACACACC GCAGGAACAA GGCCGTTGCA GCCTCCCGTA
ATACAAACAA AAGATTCGCT TGAAAACACT ACCGTTAACA AAACAGACAC ACTCAATCAA
TACGTCATTC CGGTTAAGCC GCTTGAAGTT GCTGCTAAAG ACAGTACACA GGCAATAAAA
GAACTAGACA ATTCTTATTC AAAAGGACTA ATAGATCTTA ATTCGATTTA TGGACAGAAG
AAAGATAGTG TTGCTGTACA ATCGTATTTA AATAAAACAC AGTTAAAGCA AAGCTGGAAA
GCAGCAAAAA TGGAACTGGA ACGCGAATAC AAACAATTGC GTGACAGTAT TATGTTTGCA
AAAAAGTATA AAGAGGCAGA CTCTTCAACC ATTAAATACG ATGAAGATTT ATTAATTCAG
GACGATTTTC AATTTACAGG TATATATCCG TTAGGGTCAC ATCTTTTGAC AAGCGGTTTA
TATAGAAATA AATATTCGTT AAACCTTATT GGCGGCTATA ATGGTGCGGT TTCCAAATTA
GAATTCGGGA TTGTTGGAAA TATTATCCGA AGAGAAGTAC AGGGAGTGCA ATTTGCCGGC
GTTGCAAATA TTGTTGGCGA ATATGTACGG GGATGCCAGT TTGCGGGTGT TGCAAACATC
ACAAGTCAGG AAGTAATCGG CGGACAGTTT GCCGGCATTG TAAATGTAGC AAATGGTGCC
ATGTACGGAG TACAAGGGTC AGGTGTTGTG AATGTTGGAA CAGAACAATT AGATGGCGTG
CAAGTAGCAG GATTAGTAAA TCAACACAGC GGCACCGTGA ATGGCGGGCA GATTGGTTTG
GTTAATAATG CACACAAGGT AAATGGTTTT CAATTTGGCC TGATTAATAT ATGCGATTCT
ATGCACGGTA TACCATTTGG TTTATTATCG ATTTGTAAAA ATGGATATGG AAGAATTGAA
GCGTACTATT CAGAAACAAC CCGCGCCAAT GTATTGATCA AAAGCGGCGT TAAAAGTTTA
TACAATATTT TTCAGTTCGG AATAAATTTC AATTCGAGCT ACTACCGATG GACGCTGGGC
TATGGATTGG GCTCAACTGT TCAAATGAGT AAAAACGCAA CCATTTCCTT TGATGCAATA
TTAATGCACA TCAACGAAAA TCAGGCGTTC ACCGATAATT TAAATGAAGA AATACAATTT
CGTATCATGC TTGGATTAAA TATTACAAAA CGCGTTTCTA TTTTTGCTGG CCCTTCAATA
AACACATCCT TTTCAAAATA TAAAAATCCG GATGGAACAC TGGGCTCAAA AATGATTCCC
AAAAAAGGTA TTATTTACGA TCACACCATT AACGGCAAAG ATGGTTTAAG CATCTACAAC
CCGTACTGGC TGGGCTTTAA TGTTGGCTTG AGATTTTAA
 
Protein sequence
MKMRQKIHLT LLFLFISMQA SLAQVLDKKV TMQFQNISLE QALKKIKSSY GVNFSYSPDQ 
VDLSKHVSFQ VRNESLGQVL NQLFRSTPIT YRAVGNQIVL KSGKSVPKHT AGTRPLQPPV
IQTKDSLENT TVNKTDTLNQ YVIPVKPLEV AAKDSTQAIK ELDNSYSKGL IDLNSIYGQK
KDSVAVQSYL NKTQLKQSWK AAKMELEREY KQLRDSIMFA KKYKEADSST IKYDEDLLIQ
DDFQFTGIYP LGSHLLTSGL YRNKYSLNLI GGYNGAVSKL EFGIVGNIIR REVQGVQFAG
VANIVGEYVR GCQFAGVANI TSQEVIGGQF AGIVNVANGA MYGVQGSGVV NVGTEQLDGV
QVAGLVNQHS GTVNGGQIGL VNNAHKVNGF QFGLINICDS MHGIPFGLLS ICKNGYGRIE
AYYSETTRAN VLIKSGVKSL YNIFQFGINF NSSYYRWTLG YGLGSTVQMS KNATISFDAI
LMHINENQAF TDNLNEEIQF RIMLGLNITK RVSIFAGPSI NTSFSKYKNP DGTLGSKMIP
KKGIIYDHTI NGKDGLSIYN PYWLGFNVGL RF