| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3429 |
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| Symbol | ydiJ |
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| ID | 4185363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3909479 |
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| End bp | 3912406 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638073419 |
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| Product | oxidoreductase |
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| Protein accession | YP_680008 |
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| Protein GI | 110639798 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAC ATTTAGAAGA ATTAAAGAAA AACATAGAAG GCGATTTATA CTTCGATCTT
ACTATGAGAA CACTTTATGC TACAGATGCT TCTGTATATC GTGAACTGCC GTTAGCAGTA
GCAAGACCAA AGCATAAACA AGATGTTCAG AAAATAATAG CATTCGCAAA CAAATATAAA
ATAGGGATTA TTCCGAGAAC TGCCGGAACT TCGCTGGCGG GACAGGTTGT AGGAAAAGGT
ATTATCGTAG ACGTTTCCAA ATACTTTACT GAAATTTATG AAATCAATAC AAAAGAAAAA
TGGGTGCGTT TGCAGCCAGG TATTGTATTG GATGAATTAA ATAAAAAATT AGAACCGCTT
AATTTATTTT TCGGACCTGA AACGTCTACT TCTAACCGGT GTATGGTGGG TGGTATGGTT
GGTAACAACT CCTGTGGTTC ACACTCTGTC ATTTATGGTA CAACCCGTGA TCACGTATTG
GAGATTAATG GTTTCTTAAG CGATGGCAGT GAAGTAACCT TTAAATCAGT AACACTTGAA
GAGTATCAGG AAAAATTAAA ACTGGATAAT CTGGAAGGTA AGGTTTACCG TTATATCAAC
GAAACCCTTA CCAATAAAGA GAATCAGGCA GAAATCCGTG CGGAATTTCC TAAGCCGACC
ATTAACAGAC GTAACACAGG TTATGCCATT GATGTGTTGC TGGAAAGCGC TCCGTTCACC
GAAGGCAAAG AAGCTTTCAA CATGTGTAAA CTGATTTCCG GTTCTGAAGG AACATTGGTT
TTCATCAATG ATATAAAACT GAATCTGATT GATCTGCCTC CGAAAATCAA AGGTGTTATT
GCGGTGCATC TGAACACGGT TGCAGAAGCT ACACGGGCCA ATTTAATTGC ATTGGCAAAT
AAGCCGGGTG CCGTTGAATT GCTGGATGAT ATTGTATTGC AATGTACAAA AAGCAGTATT
GAACAATCTA AAAACAGAAC GTTTATTCAA GGTGATCCAG GCGCGTTGCT GATTGTTGAA
TGGGCACGGG AGACGAAAGA AGAGATAGAA GCACTTGCTG CTAAAACGGA AAAAGAGCTT
CGTGCAGCCG GTTACGGATA TCATTTTCCT TTATTGTTTG ACAATGACAT CAATAAAGTA
TGGGCGATAC GTAAAGCTGG CCTGGGTCTG TTAGGAAATA TTCCTGGAGA TATGAAAGGC
GCTGCATGCA TTGAAGATAC TGCCGTTGAC GTAAACGACC AACCTGAATT TATTGATGAG
TTTCAAAAAA TATTAGACAA GCATAATACG AAGTGTGTGT TCTATGCACA CATTGGCGAT
GGCGAATTGC ACCTGCGTCC GGTAATGAAT CTGAAAGACG AAACAGACCG TCAGTTGATG
TTTACCATAA CCGATGAAGT AGCAGATCTT GTTAAAAAAT ACAGAGGTTC ATTAAGCGGT
GAACACGGGG ATGGCCGTGT ACGTGCACCG TTTGTGAAGA AAATGATCGG TGAAAAGAAT
TATAAGATGA TCTGCGAACT GAAAAAAGTC TGGGATCCGA ATGATATTCT TAATCCGAAT
AAAATTGTAA ATGCTCCGCC CATGCTGGAG TCTTTGCGTT ACGCATCCGG CCAGCATACA
CCGGATATTA AAACAACATT CAACTTTGAA AAATCGCTGG GTATTGTGCG GATGGCAGAG
CAGTGTAATG GCGCAGGTGA TTGCAGAAAG TCTTCCATCA TTGGCGGTAC CATGTGTCCG
AGTTTCCAGG CTACGCGAAA TGAAAAAGAT ACAACGCGCG CGCGCGCAAA CATCCTTCGC
GAATTCTTAA CAACTTCCGG CAAGCAGAAT AAATTTGATC ATAAAGAAAT TTATGAAGTA
ATGGATTTGT GCCTGTCTTG CAAAGGATGT AAAAGCGAAT GTCCGTCAAA CGTAGATGTT
ACAAAATTAA AGGCAGAATT TTTACAGCAG TACTATGATG CAAACGGCGT TCCGCTGCGT
GCCCGTATGA TTGCTAATTT TGCGAAAGCT AATGCACTCA ATAAAAACTG GCCGTGGCTT
GCAAACTTTG TAATGGGTAA TCCGGTTACG GGTAGCCTGT TAAAAGGTGT TTTAGGAATG
ACGCAAAAAC GTCCGTTGCC TAAGATGTCT ATGCAGACTT TACGCACCTG GGCACGTAAA
CATGCAGATG AATTGAAACC TGCAAAAGGA CATTATGTTG GAAAAGTATA TTTATTCTGC
GATGAGTATA CCGATTACAA TGAATCTCAT ATTGGTGTTA AAGCCATTCA CCTGCTTACA
CGTTTAGGAT ATGAAGTAGT TGTACCGAAA CACCTGGAAA GTGCTCGTAC CTATTTGTCT
AAAGGGATGG TTAGAGAAGC GCAGAAGATT GTTCGAAAGA ACATTGCTAT GCTGAAAGAC
CTTGTAACGT CTGAATCCCC GCTGATCGGT ATTGAACCTT CTGCGATTTT AAGTTTCAGA
GATGAGTATC CCAACTTAGT TCCTGCAGAA GAACTGGAAG CCGCCAATCA CTTAGCAAAA
AATGCCTTTA TGATTGATGA GTTTATCGCC AATCAGTTTG ATGCAGGCAA GATCAGCAAA
GATCTGTTTA CACGTGCGAA TCGTAAAGTG AAGCTGCATG GGCACTGTCA CCAGAAGGCA
TTGTCTTCTG TAAACTTCTC TCAAAAGATT TTAACAATAC CTGAAAATTA TAAAGTTGAA
GTGATTCCTT CAGGATGCTG CGGGATGGCC GGTTCATTCG GATATGAGAA AGAACATTAT
GATTTGTCTA TGCAGGTAGG TGAGCTGGTA TTGTTCCCCG CAGTACGCAA GGCAGATGAG
CAGACAATCA TCGCGGCCCC GGGTACGAGC TGCCGTCACC AGATTAAAGA TGGAACGGGC
AGAGAAGCGA AACACACCGT TGAAATATTG TTTGAAGCAT TAGCATAA
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| Protein sequence | MLAHLEELKK NIEGDLYFDL TMRTLYATDA SVYRELPLAV ARPKHKQDVQ KIIAFANKYK
IGIIPRTAGT SLAGQVVGKG IIVDVSKYFT EIYEINTKEK WVRLQPGIVL DELNKKLEPL
NLFFGPETST SNRCMVGGMV GNNSCGSHSV IYGTTRDHVL EINGFLSDGS EVTFKSVTLE
EYQEKLKLDN LEGKVYRYIN ETLTNKENQA EIRAEFPKPT INRRNTGYAI DVLLESAPFT
EGKEAFNMCK LISGSEGTLV FINDIKLNLI DLPPKIKGVI AVHLNTVAEA TRANLIALAN
KPGAVELLDD IVLQCTKSSI EQSKNRTFIQ GDPGALLIVE WARETKEEIE ALAAKTEKEL
RAAGYGYHFP LLFDNDINKV WAIRKAGLGL LGNIPGDMKG AACIEDTAVD VNDQPEFIDE
FQKILDKHNT KCVFYAHIGD GELHLRPVMN LKDETDRQLM FTITDEVADL VKKYRGSLSG
EHGDGRVRAP FVKKMIGEKN YKMICELKKV WDPNDILNPN KIVNAPPMLE SLRYASGQHT
PDIKTTFNFE KSLGIVRMAE QCNGAGDCRK SSIIGGTMCP SFQATRNEKD TTRARANILR
EFLTTSGKQN KFDHKEIYEV MDLCLSCKGC KSECPSNVDV TKLKAEFLQQ YYDANGVPLR
ARMIANFAKA NALNKNWPWL ANFVMGNPVT GSLLKGVLGM TQKRPLPKMS MQTLRTWARK
HADELKPAKG HYVGKVYLFC DEYTDYNESH IGVKAIHLLT RLGYEVVVPK HLESARTYLS
KGMVREAQKI VRKNIAMLKD LVTSESPLIG IEPSAILSFR DEYPNLVPAE ELEAANHLAK
NAFMIDEFIA NQFDAGKISK DLFTRANRKV KLHGHCHQKA LSSVNFSQKI LTIPENYKVE
VIPSGCCGMA GSFGYEKEHY DLSMQVGELV LFPAVRKADE QTIIAAPGTS CRHQIKDGTG
REAKHTVEIL FEALA
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