Gene CHU_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3348 
Symbolmrr 
ID4184598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3825218 
End bp3826117 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content34% 
IMG OID638073337 
Productrestriction endonuclease 
Protein accessionYP_679927 
Protein GI110639717 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.26696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0571713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AAAAAAGTAG TCAGGCTGAA TTTATAAAAT GGTTTGGTCC TGTATTAGAG 
GCATTGAAAG CTTTAGGAGG TTCTGCTAAA CCTAGGGAAA TAGCCTCATG GATAGGAGAA
ACATATAAAA TTTCGGAAAA TATTTTAAAT GCACGATATG AAAAGTCCGG CCAGTTAAAA
TTCCCGAATC AAATTGCCTG GGCAAGACAA TATTTGGTAT GGGATGGTTT ATTAGATTCT
TCAAAGCATG GCGTCTGGAC ATTAACATCA AAAGGCTGGA CTACAAAATT AAACGATGCT
CAGGCGCATG ATATTTTTCT TAAATGGGTT AAGATATTTC AGGATCTAAG AGAAAATAAG
GACCCAATTG AAAAAGCAAC ACAAGAAGTT GTGCAAGCAC AGGAAACAAA TGAACTGGAA
GAAGGGCAGG CTGTTATAAA ACCATCACTT ATTGAAGTAT TGCAAAGCAT ATCTGCAGTT
GGGTTTGAAC ATTTATGTGG ACGGTTATTA AAAGAATATA ATTTTGAAAA TGTAGAAATT
ACTCAGCGTT CTAACGATGG AGGTATTGAT GGATATGCGA CCTTAAAAAT AAATCCGTTT
GTTAGCTTAA GTGTATTTTT TCAATGCAAG CGTTATCAGG GTACAGTTCC TACAGAAAAG
GTTCAGGCGT TTATTGGAGT GATGGAAACA AATAAACGCA GTGTTGAAAA AGGATTAATA
ATTACTACTG GTTCTTTTTC AAAAAATGCC ATTGAAATTG AAAAATCCAA TATCAAACTG
GAATTAATTG ATGGAGACAA ATTAGTTGAA ATGTTTGAAA ACGTTGAGTT GGGTGTTACA
CCTAAAACGA TTTTTGAGCC TGATATGAAA TTTTTCGAAC AGTATAGAGA TATGAACTAA
 
Protein sequence
MSKKKSSQAE FIKWFGPVLE ALKALGGSAK PREIASWIGE TYKISENILN ARYEKSGQLK 
FPNQIAWARQ YLVWDGLLDS SKHGVWTLTS KGWTTKLNDA QAHDIFLKWV KIFQDLRENK
DPIEKATQEV VQAQETNELE EGQAVIKPSL IEVLQSISAV GFEHLCGRLL KEYNFENVEI
TQRSNDGGID GYATLKINPF VSLSVFFQCK RYQGTVPTEK VQAFIGVMET NKRSVEKGLI
ITTGSFSKNA IEIEKSNIKL ELIDGDKLVE MFENVELGVT PKTIFEPDMK FFEQYRDMN