Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3142 |
Symbol | secY |
ID | 4183620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3588242 |
End bp | 3589564 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638073130 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_679724 |
Protein GI | 110639515 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0487569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.382691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT TCATTACTAC TTTTAAGAAT ATATTCTCAA TAGAAGAACT TCGTACGAGA ATCTTCACAA CGATAATGTT CCTAGTTATG TTCAGACTAG GTTCTTTTGT TGTTTTACCA GGTGTAGACC CGAGTAAAAT TACTGAAGGT ACGAATACTA GCGGAATATT AGGTGTTATT AATACTTTCT CCGGCGGTGC ATTCAATAAC GTATCCGTAT TTGGATTAGG TATCATGCCG TACATCTCGG CTTCAATTGT TCTTCAATTA TTGACCTTTG CAGTTCCATA TTTTCAACGT TTACAAAAAG ACGGTGAATC AGGAAGAAAG ACAATAAACC AGTATACAAG AATTTTAACA ATTTTCATTA CAGTTGCTCA ATCAATAGGT TATTTAGCGG CAACATTAGA TGAAGGTATG ATTTATGAAG GAATGAATAC ACCTTTCATG AATGTAGTTA GAATTGTTAC ATTGATTTCC GGAACTATGT TCTGTATGTG GATCGGTGAG CGTATAACTG AAAAAGGAAT TGGCAATGGT ATTTCAATGT TGATCATGAT TGGTATTGTT TCAAGATTAC CATTCGCATT AATGGCTGAA GTATCATCTA AAAATCTTGA AGGTGCATTA CCATTACTAA TAGAATTTGC AGCTTTATTT GCAGTAATCA TGCTGGTAGT TCTTGTGCAG CAGGCTACGC GGAGAATACC AATTCAATAT ACCAAACAAA TTGCCGGAGG TAAGCAGGTA ATTGGTCAAC GTCAATATTT ACCGTTGAAA TTGATTGCTG CAGGCGTTAT GCCGATTATC TTTGCTCAAT CTGTGATGTT CCTTCCTGCA ATTATCGGAT CTTCATTTCC TGATTCGGAA TTTGCAACAA CGATTGGTTC AACAATGAGT GATTTCACTT CCTGGCAATA CAATGTTGCT TTTGCAACAA TGATCATATT GTTTACTTAT TTCTATACAG CAATCACGGT TAATCCGAAT TCAATTGCTG AAGATTTAAG AAGAAACGGG GGATTTATTC CTAGTGTTAA GCCAGGTCTT GCGACATCAG AGTATATTGA TGATGTACTT ACAAAAATAA CATTGCCTGG ATCTATATTT CTTGCTCTTT TAGCAATCTT ACCTGCTTTT GCAAGTATGA CTGGAATTGA AAAGGAATTT GCATATTTCT ACGGCGGTAC TTCTTTGTTG ATTATGATTG GTGTTGTGCT TGACACACTT CAGCAAATCG AAAGCTTCTT ATTGATGAAG CATTACGATG GAATGATGCA AACCGGTCGT GTTAAAGGAA GATTAGATAC AGCTGCTGTT TAA
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Protein sequence | MKRFITTFKN IFSIEELRTR IFTTIMFLVM FRLGSFVVLP GVDPSKITEG TNTSGILGVI NTFSGGAFNN VSVFGLGIMP YISASIVLQL LTFAVPYFQR LQKDGESGRK TINQYTRILT IFITVAQSIG YLAATLDEGM IYEGMNTPFM NVVRIVTLIS GTMFCMWIGE RITEKGIGNG ISMLIMIGIV SRLPFALMAE VSSKNLEGAL PLLIEFAALF AVIMLVVLVQ QATRRIPIQY TKQIAGGKQV IGQRQYLPLK LIAAGVMPII FAQSVMFLPA IIGSSFPDSE FATTIGSTMS DFTSWQYNVA FATMIILFTY FYTAITVNPN SIAEDLRRNG GFIPSVKPGL ATSEYIDDVL TKITLPGSIF LALLAILPAF ASMTGIEKEF AYFYGGTSLL IMIGVVLDTL QQIESFLLMK HYDGMMQTGR VKGRLDTAAV
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