Gene CHU_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2794 
Symbol 
ID4187180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3183792 
End bp3186104 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content35% 
IMG OID638072783 
Producthypothetical protein 
Protein accessionYP_679385 
Protein GI110639176 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0547661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0162252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GTTTAACTGA TATAAATAAA TCTGAAGAGG CATTTACAGC TTATAAGCCT 
ATTTTTTTTA GACTTGCTTT TGAAAAAGAC AGGTTAGCGC TTGAAAAGCT TTTAAGTGAC
AATGACAGGA TATTCATCTT TAACGAAATA CAGGGGCAAT TAAAAGAACT TATCAAATTA
TTACATCCGA CCAGAAAACT TAACGACGCT GATTACGATT ATTTGATTGA CAATCACCTT
AATGGTCTTC CAATGGAAGA ATACGGGGTT TGGGTCTATT ATCCATGGTC CAATCGGTTA
GTTCATATTT TGGATGAACA TGAATTTATA GAAGTCAGAA CAAACAGAAA TCAATACAAG
ATTACACCAG AAGAGCGTGA CAAACTCTCG AAACAAAAAA TTGGCGTCAT TGGATTATCT
GTAGGACAAT CTATTTCTTT AACCTTAGCC TTAGAAAGAA GTTTTGGTGA ATTAAGAATA
GCAGACTTTG ATGTTCTCGA ATTAAGCAAT CTGAATAGAA TAAGAAGTGG TTTATCAAAT
TTAAATTTAA AAAAGACAGT TTGTGTTGCC AGAGAAATTC TGGAAATAGA TCCCTTTTTG
AATGTTACAC TTTTCTCAGA TGGTATTACC GAGGATAATA TAGATGATTT TTTTCTTAAG
AACGGTAAGT TAGATCTTGT TATTGACGAG TGCGATGGTT TGGATATAAA GATATTGTGC
CGGTATAAAG CGAAAGAGTT GAAGATCCCT GTGTTCATGG AATCCAGTGA CAGAGGTACT
ATTGATATAG AACGTTTTGA TCTGGAACCT GATCGCACGA TTTTACATGG ATTAATAGAC
CATCTTGATC ACAAGAAATT AAAATATTTA AAAACGAATG AGGAAAAAAT TCCATACATA
CTTCCTATGT TAGGGACTGA TACCATATCG AAAAGAATGA AGGCTTCTAT GGTAGAGATC
GAACAAACAA TTACGACCTG GCCTCAGTTG GCTTCTTCAG TGGTTTTTGG CGGTGGTATC
GGTGCTGATA TTTGCAGGAG AATCATATTA GATCAGTTTC ACGACTCGGG TAGATATATT
GTTGACATGG AAGAATTAGT CGGCAATAAA ATAAAGATCA ATCCAACAAC TGAACGATCC
TTTCCATCCT TTCCTGAAAT TACCGGAGAG GACATGGAAA ATACGTATAA AGAATTAAGT
ATAGAAATAA GAAGTGCCAA CTTCTTATTA AGCGAAGGAA CGCTGTTTGA ATTAATAAAC
GCAGCTAATC TTGCTCCTTC CGTTGGAAAT AACCAACCAT GGAAGTGGTT TTACAAAGAA
GGTTCTCTTT TGCTGTTTCA TGATAAAAGT ATCACGATTT CATTTGGTGA TTATGACGAA
GTAGGAAGTA ATGTAACGAT GGGAGCCTGC ATTGAAAATC TTATCCTGAA AGCTCATCAC
TTAGGTTTGA ATGTCACTAA AAATATTTTC CCACTTCCTG AAAAACCCTT ACTCGTTGCT
GTTTTCTCAT TTTCAGAAAT ATTACCTGCT CAAAAACAAC CTACTGATTA TTTAGTAAAT
TATATTGAAA AGAGATGTAC AAACAGAAAT AATGGCAAAA GAATCTCTGT AGACAAGTCA
GATATTGATT CATTAAAAAA TATTGCTCAA TCAATACCTG GAGCAGTGTT GCATATTATT
GAATCGGATG CCGATTTGGA GGCAATTAAA AATGTAATCG CCGCATGCGA CAGATTAAGG
TTTATGCATC CTGAAGGGCA TCACGATTTT TTTACTAAAG AAATACGGTG GACAAAAGAA
GACTGTGAAA AAACACGGGA TGGTTTAGAT ATTGCAGCTT TTGATTTAAC ACCTTCGGAA
GTAGCCGGCT TCAAAATGGC CTCAGACCCG GATGTCATTA AATATCTCAC AATATGGGAA
GGTGGAAAAG CTTTTGAAAA GATGACCAGA AAAGCTGTAG ATTCTGCGGC TGCCATTGCT
TTCTTAACAA TGCCAACATA CAACAACGTG AATTACTTAT TGGGTGGACA GTGTGTGCAA
AGAATATGGC TGGAAGCTAC AAAACGGAAT TTATCCATAC AGCCAATGTT AGCACCTCTT
TTTTTATTCA CAAGATTAAT ACATGGAAAT GGCGAAAACA TACCAGCGAA AATGTCTGAT
GAGCTGAAAG AATTAAGAAA AAAATTCCTT ACTATATTTC CGATAAAAGA AAATATGGGA
GAAATATTCC TTTTCAAAAT ATCACTTTCA TCAGAACTCC AGGTTAGATC CCTGAGAAAA
CCGGTTGAAT CAGTTCTTAC CTGGACGAAA TAA
 
Protein sequence
MNKRLTDINK SEEAFTAYKP IFFRLAFEKD RLALEKLLSD NDRIFIFNEI QGQLKELIKL 
LHPTRKLNDA DYDYLIDNHL NGLPMEEYGV WVYYPWSNRL VHILDEHEFI EVRTNRNQYK
ITPEERDKLS KQKIGVIGLS VGQSISLTLA LERSFGELRI ADFDVLELSN LNRIRSGLSN
LNLKKTVCVA REILEIDPFL NVTLFSDGIT EDNIDDFFLK NGKLDLVIDE CDGLDIKILC
RYKAKELKIP VFMESSDRGT IDIERFDLEP DRTILHGLID HLDHKKLKYL KTNEEKIPYI
LPMLGTDTIS KRMKASMVEI EQTITTWPQL ASSVVFGGGI GADICRRIIL DQFHDSGRYI
VDMEELVGNK IKINPTTERS FPSFPEITGE DMENTYKELS IEIRSANFLL SEGTLFELIN
AANLAPSVGN NQPWKWFYKE GSLLLFHDKS ITISFGDYDE VGSNVTMGAC IENLILKAHH
LGLNVTKNIF PLPEKPLLVA VFSFSEILPA QKQPTDYLVN YIEKRCTNRN NGKRISVDKS
DIDSLKNIAQ SIPGAVLHII ESDADLEAIK NVIAACDRLR FMHPEGHHDF FTKEIRWTKE
DCEKTRDGLD IAAFDLTPSE VAGFKMASDP DVIKYLTIWE GGKAFEKMTR KAVDSAAAIA
FLTMPTYNNV NYLLGGQCVQ RIWLEATKRN LSIQPMLAPL FLFTRLIHGN GENIPAKMSD
ELKELRKKFL TIFPIKENMG EIFLFKISLS SELQVRSLRK PVESVLTWTK