Gene CHU_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1178 
Symbol 
ID4183389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1355950 
End bp1356258 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content33% 
IMG OID638071175 
Producthypothetical protein 
Protein accessionYP_677793 
Protein GI110637586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000151745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00726901 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAAGCAAT AGCTAAAAAA TTAGGTAACA ATCCTGCCAA AAAGGTAACT 
AAGGTGACTA AAAAAGTTGT AAACAAAAAA ACAGATAAAC ATATTCAAGC TTTAGCAGCT
AGAATCCGAC AAATACGTAA AAAGTTGGGT TATACAAATG CCGACTTTTT CGCCTATGAG
CACAATATTT CCCGATCACA ATTTTCACGT TATGAATCAG GAGAAGATAT CCGTTTTTCT
AGTTTGATGA ACGTAATAAA TGCTTTAGGG ATGACAGCAG AAGAATTCTT TAGTGAAGGT
TTTGATTAA
 
Protein sequence
MEKKKAIAKK LGNNPAKKVT KVTKKVVNKK TDKHIQALAA RIRQIRKKLG YTNADFFAYE 
HNISRSQFSR YESGEDIRFS SLMNVINALG MTAEEFFSEG FD