Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1178 |
Symbol | |
ID | 4183389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1355950 |
End bp | 1356258 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638071175 |
Product | hypothetical protein |
Protein accession | YP_677793 |
Protein GI | 110637586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000151745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00726901 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAAGA AAAAAGCAAT AGCTAAAAAA TTAGGTAACA ATCCTGCCAA AAAGGTAACT AAGGTGACTA AAAAAGTTGT AAACAAAAAA ACAGATAAAC ATATTCAAGC TTTAGCAGCT AGAATCCGAC AAATACGTAA AAAGTTGGGT TATACAAATG CCGACTTTTT CGCCTATGAG CACAATATTT CCCGATCACA ATTTTCACGT TATGAATCAG GAGAAGATAT CCGTTTTTCT AGTTTGATGA ACGTAATAAA TGCTTTAGGG ATGACAGCAG AAGAATTCTT TAGTGAAGGT TTTGATTAA
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Protein sequence | MEKKKAIAKK LGNNPAKKVT KVTKKVVNKK TDKHIQALAA RIRQIRKKLG YTNADFFAYE HNISRSQFSR YESGEDIRFS SLMNVINALG MTAEEFFSEG FD
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