Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1004 |
Symbol | glpD |
ID | 4186915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1152116 |
End bp | 1153747 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071001 |
Product | glycerol-3-phosphate dehydrogenase (aerobic) |
Protein accession | YP_677621 |
Protein GI | 110637414 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.100601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.109273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTACT ACCAACAACG CGCAGCACTT TTAGAGCATG CCACTCAGGT TGAATACGGT CTTATCGTTA TCGGAGGCGG GGTAACAGGC TGTGGTATCG CATTGGATGC ACAGTCCAGA GGCATTCCAA CCTTATTGAT TGAGATGCAT GATATTGCTT CGGGTACATC TTCACGTTCT ACCAAACTGA TCCATGGCGG ACTTCGCTAC CTGAAGCAGC TGGAATTCGG ATTGGTAAAA GAGACGGGTA GAGAGCGCGC TGTTGTACAT CACCTGGCAC CGCATATCAC TATTCCTGAA CCTATGTTAT TGCCAATTAT CAAAGGCGGT TCTATGCCTA AATGGATGGC TTCAATGGGT ACATTAATCT ACGATTTTTT AGCTGGTGTT AAGAAAAGCG AGCGCAGGAA AGTACTCAAT AAAGCAGATA CACTTGCTGC AGAGCCCTTA TTATCGGGTT TAAATGTTAC CGGCGGTATA CGCTACTATG AATACCGGAC CGATGATGCC CGTTTGACTA TGGCGCTTGC ATGTACCGCA AAAGCGCAGG GTACAACGGT ATTGACCTAT ACAAAAGTAG TGAAACTGAT GTACCAGGCA GGAGAGATCA TTGGTGTAAA AGTAATTGAC CGTTTTACAG ATAAAGAATA TATTTTAAAA TCGGAAGAAG TGATCAATGC TGCCGGCCCC TGGGTCGACA GCATTGATGA GCAGGATGCG GATATCCGTA AAAATAAACT GGTACTTACA AAGGGCGTAC ACATTGTAGT GGATTTTAAA AAGTTTCCGA TTCAGCAGGC CGTTTATTTT GATGTGGGAG ACGGGCGTAT GGTGTTTGCT ATTCCAAGAG AAAAGAAAAC GTACATCGGT ACAACAGATA CTAAATACAC CGGAGATTAT AAAGAGCCGG GGATTGAAGA GGCAGATAAA ACCTATTTGA TCGGATGTAT CCGGACAGCG TTTCCGGGTG TAACCTTGAC GGTTGCTGAT ATAGAAAGTT ATTGGTCGGG CTTACGTCCG CTGATCCGTC AGCGCGACAG TAAATCGCCT TCGGCTATTT CAAGAAAAGA TGAAGTCTTT CAAAGCGCAA CCGGTCTGTT AAGTATTGCC GGGGGGAAAC TTACCGGCTA TCGTAAAATG GCGGAACGTA TTGTCGATAT TGTTGCCGAA CGCTTAAAAC TTGCTTATGA TATTGATACG TGCCAGACAG AGTTTCATTT ATTAAGCGGC GGCGATATTG CTAAGCACGG CGGGCTAGAC ACATTTATTG CTGAGATGCT GCCTGTATTG AAAGCATTTG GTTTGGATAC CAATACGGCA GCACGTATGA TCCGCTTGTA TGGAAGTAAT ATTCATTTGT ATGAAGCCGA ATTAAAACAC ATAGATGAAA GGCTGGCTTC CATCAATCTT CCGGATTGGC AGAAAGCACA ATTACAGTAC ACGATCAAAC ATGAGTTTGT TTGTAAACCT GCAGATTTTA TTGTCCGCCG TACGGCAGAC TTTTATTTCA GACGTGCTGA AGCCGAGCAG TATGCCTCGG AACTTATTAA AGCAATGCAG CTGCTGCTTG GCTGGACAGA CCAGGAGTAT GCGCTGTACA ACGAAGAATG GCTGTTATTT CTCAAAAAAT AA
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Protein sequence | MNYYQQRAAL LEHATQVEYG LIVIGGGVTG CGIALDAQSR GIPTLLIEMH DIASGTSSRS TKLIHGGLRY LKQLEFGLVK ETGRERAVVH HLAPHITIPE PMLLPIIKGG SMPKWMASMG TLIYDFLAGV KKSERRKVLN KADTLAAEPL LSGLNVTGGI RYYEYRTDDA RLTMALACTA KAQGTTVLTY TKVVKLMYQA GEIIGVKVID RFTDKEYILK SEEVINAAGP WVDSIDEQDA DIRKNKLVLT KGVHIVVDFK KFPIQQAVYF DVGDGRMVFA IPREKKTYIG TTDTKYTGDY KEPGIEEADK TYLIGCIRTA FPGVTLTVAD IESYWSGLRP LIRQRDSKSP SAISRKDEVF QSATGLLSIA GGKLTGYRKM AERIVDIVAE RLKLAYDIDT CQTEFHLLSG GDIAKHGGLD TFIAEMLPVL KAFGLDTNTA ARMIRLYGSN IHLYEAELKH IDERLASINL PDWQKAQLQY TIKHEFVCKP ADFIVRRTAD FYFRRAEAEQ YASELIKAMQ LLLGWTDQEY ALYNEEWLLF LKK
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