Gene CHU_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0908 
Symbol 
ID4186376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1038394 
End bp1039662 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content39% 
IMG OID638070908 
Productzinc protease 
Protein accessionYP_677529 
Protein GI110637322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00811957 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA ATACTACATA CAAACAATAC ATTCTTCATA CGGCATTATT TCTGCTTACG 
CTTGTAACGA CAACGCTTGC TGGTGCTGAG TGGACGGGCA AACATTATTT AAACGGCTGG
GATTTCGTCT GGAGCGGATT AGATTACTCC ATTACTTTTC TGGGCATTTT AACTATTCAT
GAAATGGGGC ATTATTACTT TGCCAGAAAA AATAATGTTG ATGCAACGCT CCCCTACTAC
ATCCCTTTCT ATTTTCCCGG CATACCCTCA ATAGGTACGT TTGGTGCATT TATCCGGATG
AAAGGTATCA TTCATTCCAG AAGAACAATG TTTGATATCG GCATTGCCGG ACCATTGGCG
GGCTTTGTTG CTGCCATTTT ATTATTAGTA TATGGTTTTG CAACCCTTCC GGAAAAGTCT
TATTTATTTC GTATCCATCC TGAATACGCT GCAATACAAG GCGATTACCG ACATGAAGCA
TACACCTATG ATTTTATAAA GAAACGAAGT GATTTACATA CAGAGTTAAC TTTTATTCAG
GACTCTATTT ATTACCTGCA ACACCATGAC TCCATTCCGG AGCTGAAAAA ACCTGTTAAA
GCATATGAAA CAGAATTTGA AGTTATTGTT GTCGGTAAGA ATTTATTATT CCTGCTGTTT
GAAAAACTAT TCTCCTATCA GGGTGATCGT TTACCCGATC CGCATGAGCT GTATCATTAC
CCATTTATAT TTGCGGGTTA TTTAGCGCTT TTTTTCACCG CATTGAATCT TATACCTGTC
GGTCAGCTTG ATGGCGGCCA CGTTACGTAT GGACTATTTG GATATGAACG AAGTAAAAAA
ATATCTGCGG TGTTTTTCAT TCTGTTTGTA TCTATTGCAG GCGTTGGTAT GTTCAAAGAA
AATATCCTGC AGATTAATTT CTTTACCGCT AATGCAGCAG ATCAATTAGA ATTTGCTTTT
TTCTATTTGA TATTTCTGTA TCTGATTTTT GCAAAAATGT TTGAAACGTT TTTGAATGCA
CTGCTCACAG CAGTTGCAGT ATTCACGTTT CAATTCCTGG TTGAATTTCT TTTTCCGGAA
ATTACCGGTT ATGGATTTTG GTTGTTATAT GCGTTTTTAA TCGGTCGTTA TCTGGGTGTA
TATCATCCAC CGGCATTGAG CGAACAACCG CTTGATACGA AACGGAAAGT ATTAGGCTGG
ATTGCCTTAG GCATCTTCGT GCTGTGTTTT ACACCTGAGG TTGTTTCATT TGAATTGATC
CGCCCGTAG
 
Protein sequence
MRNNTTYKQY ILHTALFLLT LVTTTLAGAE WTGKHYLNGW DFVWSGLDYS ITFLGILTIH 
EMGHYYFARK NNVDATLPYY IPFYFPGIPS IGTFGAFIRM KGIIHSRRTM FDIGIAGPLA
GFVAAILLLV YGFATLPEKS YLFRIHPEYA AIQGDYRHEA YTYDFIKKRS DLHTELTFIQ
DSIYYLQHHD SIPELKKPVK AYETEFEVIV VGKNLLFLLF EKLFSYQGDR LPDPHELYHY
PFIFAGYLAL FFTALNLIPV GQLDGGHVTY GLFGYERSKK ISAVFFILFV SIAGVGMFKE
NILQINFFTA NAADQLEFAF FYLIFLYLIF AKMFETFLNA LLTAVAVFTF QFLVEFLFPE
ITGYGFWLLY AFLIGRYLGV YHPPALSEQP LDTKRKVLGW IALGIFVLCF TPEVVSFELI
RP