Gene CHU_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0112 
Symbol 
ID4185942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp135400 
End bp137580 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content42% 
IMG OID638070114 
ProductFe-S oxidoreductase 
Protein accessionYP_676745 
Protein GI110636538 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.702038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATAT CCTTATTCAT ACCGCCCTTA ACGCAGATAA ATACGCCATA TCCTGCAACA 
GCCTACCTGA AAGGGTTTCT GAATGAGACA GTATATACGG ATTGTACACA ATCAGATCTG
GGTCTGGAGC TGATCCTTGG CATCTTTAAT AAAAAAACAC TTGTTCAATT GTTTGACGAA
GCATCTTTGA AAAAAGATCT GTCGCCCAAT GTGCAGCACA TTTTAAGTCA GCGCGATCGT
TATGCGTTTT GTGTAGATGC CGTCATTCGT TTTCTGCAAA ATAAAAATAT AACACTTGCG
CATAAGATCT GTGCAGGTGA TTATCTTCCG CAGGCTTCAC GTTTCGAAGC ACTGAATGAA
GAAGTTGAAT GGCTGTTTGG AAGCATGGGT ATACACGACA AAGCTAAAAT GCTTTGCACG
CTGTTCATTG AAGATATCGG AGACTTGATC ATCGAATGCA TTTCACCCTA TTTTGGATTC
AGTAGGTATG CAGAAGACAT TGCACGCTCA GCAACATCGT TTGACCCATT GCTTAAATTA
CTGGAAGAAA AAAATAATAG TATTGACTCA ATATTGGTTT CCATCGTTGA TAAACATATT
GAACTTGAAC GGCCTGATAT TGTAATTTTT ACAATTCCTT TTCCGGGAAA TGTTTATGGC
GCATTCAAAG CGGGGCAACA CATAAAGAAA ATATATCCGC ATATAAAAAT TGCGATGGGA
GGCGGTTTTC CTAACACAGA ACTGCGTAGC CTGACAGATG CACGAGTATT TGACTTTACA
GATTTTATCT CACTGGATGA TGGCGAAAGA CCAATACTTA ATATACTGGA ATATTTAGAA
GGCAAAAGAG AAAAAGCCTT ATTGAAGCGC ACATTCATTC GTGAAGCAGG GCAAGTCATG
TACATCAATG GCTGTAAGAT GCCGGATATA GCCCATAGCA AAACGGGAAC ACCGGATTAC
ACGGGCTTGT TGTTGGATGG ATACATTTCG ATGCTTGAAA TGGCAAACCC TATGCACCGA
TTATGGAGTG ACGGACGGTG GAACAAAATA ACCGTGGCTC ATGGCTGTTA CTGGAAGAAA
TGTTCTTTCT GTGATATTTC ATTGGATTAC ATCGGCCGGT ATGAACCTGC AGCAGCGAGT
GTGCTGGCCG ACAAGATCGA AACCATTATT GCACAAACAG GTACTACAGG CTTTCACTTT
GTAGATGAAG CCGCACCGCC TTTAGTAATG CGTGATTTAG CGCTGGAAAT TTTAGATCGC
AAACTGGATA TTTCCTGGTG GGCAAACATT CGTTTTGAAA AAACATTTTC AGACGACTTA
TGTAAACTGC TTGCAGCTTC TGGTTGCATT GCGGTTACTG GAGGGTTGGA AGTAGCGTCG
GATCGGCTAT TACAGATGAT GGAGAAAGGT GTGAGTGTGG CGCAGGTCTC TCAGGTTGCA
TCAAACTTTA CACAGGCAGG CATCATGGTA CATGCCTATC TGATGTTTGG ATTTCCAACA
CAAACGGCAC AGGAAACAAT TGACTCACTT GAAGTGGTTC GTCAGTTGTT TGAAGCACGT
GTACTGCAGT CGGGCTTCTG GCATCGTTTC TCTATGACTG CACACAGTCC TGTTGGATTA
AATCCGGAAA AATACCAGGT AATAAAGATC GGGCCGGAAC AGGGTAGCTT TGCAAATAAT
GATCTGATAC ATGAAGACCC GAAAGGCTGC GATCATGACC TGTTTGCAGA AGGTTTGCGC
AAATCCTTAT ATAATTTCAT GATGGAAAAT TGTCTGGATT GGCCTGTGCA GGATTGGTTT
GAGTTTAAAA CTCCCAAAAC CACTTTGCAG CCAACGCTCA TACAAAGCCA TATTAATGAA
GGTTCAGGCG AAGATGAAAC GAAGCTTGCG TATAAAATTT GTTGGGTTGG CAATATGCCA
ACCTTTACAA CCCAAGGGAA AAATGTTAAG ATTGTCATTG AAACGCCCCA TGGAATGCTT
ATTACTAAGC TTGATGTAAA ATCCGCAAAT TACCTGGAGT ATACATTACA GACAATATTA
AAATCACATA AATCGCTGCT TGTGCTCTCC GATTTTTTAA AAGAATACAG TGTACAAACA
AACTTACCGG AGGAACAATT GTTGCATTCA GAAACGTGGA GTGCGATAAG GAGCGCTGGA
TTGCTGCTGA TACGGTTTTA A
 
Protein sequence
MKISLFIPPL TQINTPYPAT AYLKGFLNET VYTDCTQSDL GLELILGIFN KKTLVQLFDE 
ASLKKDLSPN VQHILSQRDR YAFCVDAVIR FLQNKNITLA HKICAGDYLP QASRFEALNE
EVEWLFGSMG IHDKAKMLCT LFIEDIGDLI IECISPYFGF SRYAEDIARS ATSFDPLLKL
LEEKNNSIDS ILVSIVDKHI ELERPDIVIF TIPFPGNVYG AFKAGQHIKK IYPHIKIAMG
GGFPNTELRS LTDARVFDFT DFISLDDGER PILNILEYLE GKREKALLKR TFIREAGQVM
YINGCKMPDI AHSKTGTPDY TGLLLDGYIS MLEMANPMHR LWSDGRWNKI TVAHGCYWKK
CSFCDISLDY IGRYEPAAAS VLADKIETII AQTGTTGFHF VDEAAPPLVM RDLALEILDR
KLDISWWANI RFEKTFSDDL CKLLAASGCI AVTGGLEVAS DRLLQMMEKG VSVAQVSQVA
SNFTQAGIMV HAYLMFGFPT QTAQETIDSL EVVRQLFEAR VLQSGFWHRF SMTAHSPVGL
NPEKYQVIKI GPEQGSFANN DLIHEDPKGC DHDLFAEGLR KSLYNFMMEN CLDWPVQDWF
EFKTPKTTLQ PTLIQSHINE GSGEDETKLA YKICWVGNMP TFTTQGKNVK IVIETPHGML
ITKLDVKSAN YLEYTLQTIL KSHKSLLVLS DFLKEYSVQT NLPEEQLLHS ETWSAIRSAG
LLLIRF