| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0052 |
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| Symbol | degQ |
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| ID | 4186973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 63736 |
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| End bp | 65187 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070051 |
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| Product | serine protease |
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| Protein accession | YP_676686 |
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| Protein GI | 110636479 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00292411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGCGG TAGTGTCTTC TATCTTTGGA GGCATTGTAG CTTTAGTCGG CTACCAGTAT
TTTGTCAAAA AGAATGAATT TACGTCCATT GAATCGATGC AGCGCGCATC CTTTGCAAAT
TTTTCAGATA CATCTGCTAT CGCAGTGCCT GCGGGTCTCA ATTTTATTCA TGCCGCAGAA
TTGACTACAC CGGCAGTAGT GCATATAAAA ACAACGTATA TGCCTGAAAC TACACGCCCT
AAAACGCGTG ATGAAGAATT GTTCCGGTAC TTCTATGGTG ATCCGTATGA AAATTACAAC
CAGCCGCGCG AAGCTTCCGG CTCCGGCGTT ATTGTTACCG GCGGCGGATA TATCGTAACA
AATAATCACG TGGTTGATAA AGCATCTAAG ATTCAGGTTG TATTAAATGA CAAAAGAACC
TACGATGCAA AACTGATCGG AACAGATCCG ACAACGGATC TGGCATTGAT TAAAATTGAA
GGTGAAAATC TTCCGTTTGT AGTGTATGGC AACTCGGATC AGGTGCGTAT CGGTGAGTGG
GTACTGGCTG TAGGAAATCC GTTTAACTTA ACGTCTACGG TTACCGCAGG TATTATCAGC
GCTAAAACAA GAAGCATCAA TATCCTGAGA GATAAAGATA ACATGGCGAT TGAATCTTTT
CTGCAGACAG ATGCGGTAGT AAACCCGGGC AATAGCGGTG GTGCATTGGT AAACTTAAGA
GGAGAACTGA TTGGTATCAA TACGGCTATT GCAAGTCCTA CGGGAGCATA TGCAGGTTAT
TCGTTTGCTG TACCGGTATC TCTTGTTAAA AAAGTGATTG ATGACATCAT GAACTATGGC
CAGGTGCAAC GTGGTTTATT AGGTGTGGTG ATTCAGGATA TGACGCCTGC TTTAGCAAAG
GAAAAAACAA TCGATTTTAT TTCAGGAGTT TATGTGAGTG CCGTTAATCA GGGAAGTGCA
GCAGACCTGG GAGGTATTAA AGAAGGCGAT ATTGTAACAA AGATCAATGA CATCAACATC
GGCGCAACAA CACAATTGCA GGAAGTAGTG GCGCGCTACA GACCCGGCGA CAAATTGAAA
GTTAAGTATG TGCGCAAAGG AAAAGAACTT GAAACTTCGG TTACCTTAAA AAATAAATTA
GGCGATATGG CCATTGTTGC TAAAGACGAC AACTCTGTTA AAACGAAGCT TGGCGCAGAC
TTACAGCCGG TATCGGGTGG TGAAATGAGT GTGCTGGAAA TTTCCGGCGG TGCAAAGGTT
GCAAAATTAT TTAGCGGTAA ATTAAAAGAA GCAGGCGTAA GAGAAGGATT TATTATTACT
TCCATCGATA AAAAACCTGT CAGCTCGCCG GAAGATGTTG TCCGCATTCT TGAATCTACT
ACCAATGGCG GTATCTTGAT GGAAGGTATT TATCCGAATG GAAAAAAAGA ATTCTACGGC
ATTGGTTGGT AA
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| Protein sequence | MLAVVSSIFG GIVALVGYQY FVKKNEFTSI ESMQRASFAN FSDTSAIAVP AGLNFIHAAE
LTTPAVVHIK TTYMPETTRP KTRDEELFRY FYGDPYENYN QPREASGSGV IVTGGGYIVT
NNHVVDKASK IQVVLNDKRT YDAKLIGTDP TTDLALIKIE GENLPFVVYG NSDQVRIGEW
VLAVGNPFNL TSTVTAGIIS AKTRSINILR DKDNMAIESF LQTDAVVNPG NSGGALVNLR
GELIGINTAI ASPTGAYAGY SFAVPVSLVK KVIDDIMNYG QVQRGLLGVV IQDMTPALAK
EKTIDFISGV YVSAVNQGSA ADLGGIKEGD IVTKINDINI GATTQLQEVV ARYRPGDKLK
VKYVRKGKEL ETSVTLKNKL GDMAIVAKDD NSVKTKLGAD LQPVSGGEMS VLEISGGAKV
AKLFSGKLKE AGVREGFIIT SIDKKPVSSP EDVVRILEST TNGGILMEGI YPNGKKEFYG
IGW
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