| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3678 |
|---|
| Symbol | |
|---|
| ID | 4181019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3964888 |
|---|
| End bp | 3965370 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638069571 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_676211 |
|---|
| Protein GI | 110636003 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGC GCTCGATCGC GCCCTATGCC GCAGTCATTT CCGCCGCCAT CTTGCTCGAC
CAGATCATCA AATTCCTGGT GGAGGAGCGG CTGCCGCTTC ATCACCAAGT TGACATCCTT
CCTTTTCTCG CACTCCTCCA TTCTCAAAAC ACGGGCATTG CGTTCTCCTT TCTTTCAGGA
GTTGGGGGCT TTTGGCTGAG CCTGCTCGTG CTCGGCGTGA TCATTTTCAT TGCAGTGCTC
GCGTTCCGTA CCGATTCGAA CCACCTGTTC GCCCGGTTGG GGTTCGCTCT GATCCTGGGC
GGGGCTGTCG GAAACCTCAT CGACCGCGCC ACGCGCGGAT ATGTGGTGGA TTATATCTAT
TTCCATACAC CCGTATGGTC CTTCGCCATC TTCAACTTGG CCGACGCCTT CATCACCGTT
GGCGCACTGC TCGTCGTTCT GGAGGAAGTG CTGAATCTTC GCCGCCAGCG GCAGGGCTCC
TGA
|
|---|
| Protein sequence | MKSRSIAPYA AVISAAILLD QIIKFLVEER LPLHHQVDIL PFLALLHSQN TGIAFSFLSG
VGGFWLSLLV LGVIIFIAVL AFRTDSNHLF ARLGFALILG GAVGNLIDRA TRGYVVDYIY
FHTPVWSFAI FNLADAFITV GALLVVLEEV LNLRRQRQGS
|
|---|
| |