Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2700 |
Symbol | ligC |
ID | 4181765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2933699 |
End bp | 2934796 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638068588 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_675242 |
Protein GI | 110635034 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.219093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGAC GGCACGGACG CAATTCACCG GAGACAATAA ACGCCGCGGC GGCGCTCGAA ATGCCGATAC CGCCTATGGA GGCGAAGACG GTGGAGACCC TGCCCGAGGA GCCGGGCTGG GACTTTGAGC CGAAATGGGA TGGCTTCCGC TGCCTTGCCC ATCGCGATGG CGATAAGATC GAGCTTTACG CCAAATCCGG CAAGCCGCTC GGCCGTTACT TTCCCGAGGT CGTGGAAATT GTGCGCGCCC TGCCTGGCCG AAAATTCATT CTGGATGGCG AACTGGTCAT CGCCCAGGGC GAGGCGCTTT CCTTCGATGC CCTGCAACTG CGGTTGCACC CGGCGGAAAG CCGGATACGC AAGCTCGCGC GCGAGACACC GGCGATGCTG ATCCTCTTCG ACATGCTGAT GAAGCCTGAC GGCGAAAGCC TCATGACGGC GCCCCTGACG GCGCGGCGCA GCGCATTGGA AAGCTTTCTG GCGCAGGCGG TGGTTTCCGG TATTCGGCTT TCGCCCCATA CGCGCGACCG AAGAGAAGCC GAAGCCTGGC TGGAGGGCGC GGGCGGAGCG CTCGATGGAG TCATCGCGAA GAAGTTCGAC GGTGCATATG AAAGTGGCGA GCGCGCCATG CTGAAGGTCA AGCGCATCCG CTCTGCCGAT TGCGTCGTGG GCGGCTTCCG CTACGGGAAA GACAGCACTC TCGTCGGCTC GCTCCTGCTC GGGCTCTTCA ACGGTGAGGG GAAGCTCGAC CATGTCGGTT TCACCTCCAT GATCAGCAAT GAGGAGCGGC CGGCTTTGAC GCGCCGGCTG GAAAAGCTCA AGGGACCGCC TGGCTTTACC GGGAAGGCGC CGGGCGGGCC TAGCCGCTGG TCGACCGAGC GCAGCAGTGA ATGGGAGCCG CTCCGGCACG AGCTCGTGGT GGAAGTCGCC TACGACCAGG TGACGGGAGA TCGCTTCCGC CACGGCACCA GGCTTTTGCG CTGGCGCCCG GACAAAGCCC CGCATCAATG CACATTCGAA CAGCTTGAGC ATGAGGCCCG CCCAGGCAAG TTGATCGAGG AGGTGATCCG CAGGCGCCGG GACGCGCGCC GTGAATGA
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Protein sequence | MAGRHGRNSP ETINAAAALE MPIPPMEAKT VETLPEEPGW DFEPKWDGFR CLAHRDGDKI ELYAKSGKPL GRYFPEVVEI VRALPGRKFI LDGELVIAQG EALSFDALQL RLHPAESRIR KLARETPAML ILFDMLMKPD GESLMTAPLT ARRSALESFL AQAVVSGIRL SPHTRDRREA EAWLEGAGGA LDGVIAKKFD GAYESGERAM LKVKRIRSAD CVVGGFRYGK DSTLVGSLLL GLFNGEGKLD HVGFTSMISN EERPALTRRL EKLKGPPGFT GKAPGGPSRW STERSSEWEP LRHELVVEVA YDQVTGDRFR HGTRLLRWRP DKAPHQCTFE QLEHEARPGK LIEEVIRRRR DARRE
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