| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2407 |
|---|
| Symbol | |
|---|
| ID | 4183172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2565067 |
|---|
| End bp | 2565987 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638068297 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_674957 |
|---|
| Protein GI | 110634749 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.333133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGATT TCCTGATTTC CCGATTGCTA TATGCCGCGG CGGTGCTGCT CGGCGTCTCC
GTCGCCGTGT TCTTCCTGAT CCGGATCGGC GGCGATCCCT CGGCGTTGTT CCTGCCGCCG
GAGGCCCCGG TCGAGGAAAT AGAGCGGTTC CGTCGGCTGA TGGGCTTCGA CCGGCCGTTG
GCGGTGCAGT ATTTCGACTT CCTCGGCCGC GCGCTCCAGG GCGACTTCGG CATGTCGCTT
CGATATGACC AGCCGGCGAT GAAGCTGGTG CTGGAGCGCG TGCCGGCCAC GCTCCAGCTG
GGCGCGATGG CGCTGCTGAT GTCGCTCGTT ATCTCAATCC CGCTGGCCAT CCTCGCTGCT
GCCAAGCATG GCTCGGCGAT CGACAGAGCA AGCCTGCTTG CCTCGCTGCT CGGCCAGAGC
TTTCCCGCAT TCTGGCTGGC AATCATGCTG ATCTTGCTGT TCTCCGAAAC GTTCCGGTTG
CTGCCGCCAT CGGGGCGGGG AACGTGGCAG CAGCTGATCA TGCCAGCGAT CGTGCTCGCC
ACATACTCGA CCGCCATCAT CACGCGCCTG TTGCGCTCTT CGATGATCGA GGTGCTGCAG
TCGGACTATG TCCGCACCGC GCGCGGCAAG GGCGTGAAGG AAAGCCGCAT CATCCTCTCC
CACGCGCTGC GCAACGCGGC CATCCCCACG CTGACAGTGA TCGGGCTCCA GGTCGGCGCG
CTGCTGGGCG GCGCCGTAAT CACCGAGGAG GTGTTTGCCT ATCCCGGAGT GGGCCGTCTG
GCGATCCAGG CCATCGCCAA CCGCGATTTT ACCGTGGTGC AGGCGTTCGT GGTCCTGATG
GCGGCGCTGA TCGTGACCAT CAACCTCCTG GTAGACCTCT CTTACGGCCT GCTCGATCCG
CGACTGAGGA AGGGCAAATG A
|
|---|
| Protein sequence | MADFLISRLL YAAAVLLGVS VAVFFLIRIG GDPSALFLPP EAPVEEIERF RRLMGFDRPL
AVQYFDFLGR ALQGDFGMSL RYDQPAMKLV LERVPATLQL GAMALLMSLV ISIPLAILAA
AKHGSAIDRA SLLASLLGQS FPAFWLAIML ILLFSETFRL LPPSGRGTWQ QLIMPAIVLA
TYSTAIITRL LRSSMIEVLQ SDYVRTARGK GVKESRIILS HALRNAAIPT LTVIGLQVGA
LLGGAVITEE VFAYPGVGRL AIQAIANRDF TVVQAFVVLM AALIVTINLL VDLSYGLLDP
RLRKGK
|
|---|
| |